Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACU0
Confidence46.99%DateThu Jan 5 11:19:02 GMT 2012
Rank432Aligned Residues36
% Identity14%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30 . . .......40.........50
Predicted Secondary structure 
...


Query SS confidence 















.
.
.

















Query Sequence  KQLIAAALAQFGEYGM. N. A. TTREIAAQAGQNIAAITY
Query Conservation    

 

  
  
 
 . . .
   

  



   

 
Alig confidence 















.
.
.

















Template Conservation   
     

  
  

    

   

  


 
 

  
Template Sequence  KEAKKEFEKIFIEEKLREYDYDLKRTAEEIGIDLSNLYR
Template Known Secondary structure  TTT
TT

Template Predicted Secondary structure 





Template SS confidence 






































   2930.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions