Job Description P0ACU0 Confidence 99.59% Date Thu Jan 5 11:19:02 GMT 2012 Rank 118 Aligned Residues 176 % Identity 16% Template c3crjC_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcription regulator; PDBTitle: crystal structure of a tetr transcription regulator from haloarcula2 marismortui atcc 43049 Resolution 2.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence												.	.	.	.	.						.							.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.													.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	E	E	I	X	Q	A	T	Y	.	.	.	.	.	R	A	L	R	D	L	T	I	Q	R	I	A	.	.	D	E	Y	S	T	A	A	V	H	Y	Y	Y	D	T	K	D	D	L	L	A	A	F	L	D	Y	L	L	E	R	F	V	D	S	I	H	D	V	E	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G	T	T	T	S	T	T	.	.	.	.	.	G	G	G					S					.	.	T	T			T	T	T	S		T	T	S	S																						T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.													.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	D	P	E	A	R	L	N	L	L	L	D	E	L	L	V	K	P	Q	E	N	P	D	L	S	V	A	L	L	E	X	R	S	Q	A	P	Y	K	E	A	F	S	D	R	F	R	Q	N	D	E	Y	V	R	Y	X	L	K	A	V	I	N	H	G	I	D	E	G	V	F	T	D	V	D	A	E	H	V	T	R
Template Known Secondary structure		.	.	S														T	G	G	G	S															G	G	G																														T	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		S	L	L	T	I	I	D	G	A	R	T	R	A	V	X	.	.	.	.	.	.	.	L	D	D	T	E	E	L	E	T	A	R	Q	T	A	S	E	Y	A	D	A	X	L
Template Known Secondary structure																	.	.	.	.	.	.	.	T	T		T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions