Job Description P0ACU0 Confidence 99.74% Date Thu Jan 5 11:19:02 GMT 2012 Rank 80 Aligned Residues 187 % Identity 14% Template c3c2bA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of tetr transcriptional regulator from agrobacterium2 tumefaciens Resolution 2.10 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P
Query Conservation																							.
Alig confidence																							.																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	Q	N	A	V	L	D	Q	A	L	R	L	L	V	E	G	G	E	K	A	L	T	T	S	G	L	A	R	A	A	N	C	S	K	E	S	L	Y	K	W	F	G	D	R	D	G	L	L	A	A	X	I	T	F	Q	Q	S	.	.	.	.	.	.	.	.	.	.	K	V	R	T	F	E	K	A	G	D	R	V
Template Known Secondary structure																				G	G	G											T											S	S														T	.	.	.	.	.	.	.	.	.	.	S	S								S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70											.	.	.	.	.	.	.	.	.	80	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		S	A	P	Q	L	A	D	H	L	E	V	F	A	H	D	L	L	D	V	L	A	G	D	V	S	L	A	L	N	R	L	A	I	G	Q	A	.	.	S	R	K	L	G	D	L	L	L	E	R	G	R	R	Q	I	D	R	R	A	R	G	L	I	E	A	G	R	R	S	G	Y	L	R	F	D	D	A	E	E	A	Y
Template Known Secondary structure																						T																.	.												T	T																	T	T	S	B			S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	F	Y	G	L	I	V	S	D	L	H	V	R	X	L	L	G	E	A	P	D	K	D	F	S	A	R	A	K	K	A	V	V	A	F	L	T	L	Y
Template Known Secondary structure										T	T							T	T					S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions