Job Description P0ACU0 Confidence 99.67% Date Thu Jan 5 11:19:02 GMT 2012 Rank 106 Aligned Residues 194 % Identity 16% Template c3bqyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative tetr family transcriptional regulator; PDBTitle: crystal structure of a possible tetr family transcriptional regulator2 from streptomyces coelicolor a3(2). Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D	R
Query Conservation																					.
Alig confidence																					.																																													.	.
Template Conservation																																																																		.	.
Template Sequence		R	A	R	T	V	Q	T	A	L	D	L	L	N	E	S	G	L	D	T	L	T	X	R	R	L	A	Q	A	X	D	V	Q	A	G	A	L	Y	R	Y	F	A	A	K	Q	D	L	L	T	A	X	A	E	H	X	V	D	G	V	A	D	A	A	G	A	.	.	T	G	D	G	D	W	S	E	R	T	A	R	L	A
Template Known Secondary structure																		G	G	G											T	S										S	S													T	T	T	G	G	G	G	G		S	.	.	T	T	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	.	.	.	.	.	.	.	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	R	A	A	L	L	A	H	R	D	G	A	R	V	F	A	G	T	H	A	T	G	P	N	T	L	R	F	A	D	G	L	V	G	V	L	R	E	A	G	F	G	D	G	D	A	A	R	A	L	Y	S	V	A	N	F	T	V	G	H	T	L	E	E	Q	A	A	L	T	P	G	G	G	G	P	L	D	E
Template Known Secondary structure										T	S	T	T							T		S	S																			T	T																													S	T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	H	T	H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G	L	S	Q
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	L	R	E	A	V	A	A	G	T	Y	P	H	L	A	A	T	L	P	.	.	.	.	.	.	.	.	.	.	.	V	L	T	S	T	D	F	T	A	H	F	E	F	G	L	R	L	L	L	D	G	L	R	A
Template Known Secondary structure										T	T	T										.	.	.	.	.	.	.	.	.	.	.			T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.												.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions