Job Description P0ACU0 Confidence 99.69% Date Thu Jan 5 11:19:02 GMT 2012 Rank 100 Aligned Residues 151 % Identity 17% Template c3aqsD_ PDB info PDB header:transcription regulator Chain: D: PDB Molecule:bacterial regulatory proteins, tetr family; PDBTitle: crystal structure of rolr (ncgl1110) without ligand Resolution 3.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence																						.																																																							.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		T	R	A	R	L	I	T	S	A	R	T	L	M	A	E	R	G	V	D	N	V	G	I	A	E	I	T	E	G	A	N	I	G	T	G	T	F	Y	N	Y	F	P	D	R	E	Q	L	L	Q	A	V	A	E	D	A	F	E	S	V	G	I	A	L	D	Q	V	L	T	K	L	D	D	P	A	E	.	.	.	.	.
Template Known Secondary structure																T	T		T	T											T	T	S		T	G	G	G	G	G	T		S	S																					T	T	T	G	G	G	S	S					.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Query Conservation
Alig confidence		.	.	.	.	.	.																				.	.	.	.	.	.																																	.	.	.
Template Conservation		.	.	.	.	.	.																				.	.	.	.	.	.																																	.	.	.
Template Sequence		.	.	.	.	.	.	V	F	A	G	S	L	R	H	L	V	R	H	S	L	E	D	R	I	W	.	.	.	.	.	.	G	G	F	F	I	Q	M	G	A	A	H	P	V	L	M	R	I	L	G	P	R	A	R	R	D	L	L	H	G	L	E	T	.	.	.	G	R	F	T	I	E	D	L	D	L	A	T	T	C
Template Known Secondary structure		.	.	.	.	.	.																				.	.	.	.	.	.					T	T		T	T																								.	.	.	T	S	B			S
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.	.	.	.	.																																	.	.	.
Template SS confidence
								106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170
		172	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	E	I	L	A	F	R	L	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	G	S	L	I	A	A	I	Q	M	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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