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Job DescriptionP0ACU0
Confidence99.25%DateThu Jan 5 11:19:02 GMT 2012
Rank157Aligned Residues162
% Identity12%Templatec2w53B_
PDB info PDB header:transcriptionChain: B: PDB Molecule:repressor; PDBTitle: structure of smet, the repressor of the stenotrophomonas2 maltophilia multidrug efflux pump smedef.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.. .......40.........50.........60.........70.........80.........90..
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Query Sequence  KKQLIAAALAQFGEYGMNA. TTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDR
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Template Sequence  REGILDAAEMIGARAGYTSEVLAAIVERVHLPFMQELERTSTDQR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   13......20.........30.........40.........50.......
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
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Query Sequence  AAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHAL
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Template Sequence  DTPVHDLRAVMIHSFIELSEDERLRKTMEIMLRSRVLTEMQQAGFRDALDRMERALRRARDL. . GQLREGADPKIAARML
Template Known Secondary structure  S

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   83......90.........100.........110.........120.........130.........140.... .....150.........160
 
   173......180.........190.........200.........210.........220...
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Query Sequence  IGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL
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Template Sequence  HATVLGVLHGAMV. . . . . . . . . . . EPELMDLKRDGMLALDMTLAAYVKDGV
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TTT

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   167..170......... 180.........190.........200......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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