Job Description P0ACU0 Confidence 99.86% Date Thu Jan 5 11:19:02 GMT 2012 Rank 7 Aligned Residues 201 % Identity 13% Template c2qcoA_ PDB info PDB header:transcription Chain: A: PDB Molecule:cmer; PDBTitle: crystal structure of the transcriptional regulator cmer from2 campylobacter jejuni Resolution 2.25 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	M	T	I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		T	P	S	Q	K	V	L	A	R	Q	E	K	I	K	A	V	A	L	E	L	F	L	T	K	G	Y	Q	E	T	S	L	S	D	I	I	K	L	S	G	G	S	Y	S	N	I	Y	D	G	F	K	S	K	E	G	L	F	F	E	I	L	D	D	I	C	K	K	H	F	H	L	I	Y	S	K	T	Q	E	I	K	N
Template Known Secondary structure																									T	T	T	T	T												T	T		T	T		S	S	S	T	T	S																										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	.	.	.	.	.	.	.	T	L	K	E	I	L	T	S	F	G	L	A	F	I	E	I	F	N	Q	P	E	A	V	A	F	G	K	I	I	Y	S	Q	V	Y	D	K	D	R	H	L	A	N	W	I	E	N	N	Q	Q	N	F	S	Y	N	I	L	M	G	F	F	K	Q	Q	N	N	S	Y	M	K	K
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.																		T	S													G	G	G		S	S										S	T	T	S	S	T										S	S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		86										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	I	L	H	T	H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G	L	S	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		N	A	E	K	L	A	V	L	F	C	T	M	L	K	E	P	Y	H	H	L	N	V	L	I	.	.	.	.	.	.	N	A	P	L	K	N	K	K	E	Q	K	E	H	V	E	F	V	V	N	V	F	L	N	G	I	N	S
Template Known Secondary structure		T														T	T									.	.	.	.	.	.																							T		S
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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