Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACU0
Confidence77.01%DateThu Jan 5 11:19:02 GMT 2012
Rank217Aligned Residues46
% Identity9%Templatec2l4aA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:leucine responsive regulatory protein; PDBTitle: nmr structure of the dna-binding domain of e.coli lrp
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10 .........20.........30.........40.........50.
Predicted Secondary structure 








.



Query SS confidence 









.








































Query Sequence  MNNPAMTIKG. EQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYY
Query Conservation 
  
    
 .  

  

 

  
  
 
   
   

  



   

  
Alig confidence 









.











.....























Template Conservation    
       

  
  

  
 ..... 
 
 
  


  



  

  
Template Sequence  VDSKKRPGKDLDRIDRNILNELQ. . . . . KDGRISNVELSKRVGLSPTPCLER
Template Known Secondary structure 




SSGGG

.....
TT

STTTS
Template Predicted Secondary structure 









.....







Template SS confidence 



















































   2.......10.........20.... .....30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions