Job Description P0ACU0 Confidence 43.78% Date Thu Jan 5 11:19:02 GMT 2012 Rank 453 Aligned Residues 38 % Identity 8% Template c2kt0A_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:homeobox protein nanog; PDBTitle: solution structure of human stem cell transcription factor nanog2 homeodomain fragment Resolution UNK

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		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure															.			.
Query SS confidence															.			.
Query Sequence		I	A	A	A	L	A	Q	F	G	E	Y	G	M	.	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K
Query Conservation															.			.
Alig confidence															.			.
Template Conservation
Template Sequence		L	C	V	L	N	D	R	F	Q	R	Q	K	Y	L	S	L	Q	Q	M	Q	E	L	S	N	I	L	N	L	S	Y	K	Q	V	K	T	W	F	Q	N	Q
Template Known Secondary structure												S	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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