Job Description P0ACU0 Confidence 99.67% Date Thu Jan 5 11:19:02 GMT 2012 Rank 105 Aligned Residues 176 % Identity 12% Template c2iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas Resolution 1.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A
Query Conservation																											.
Alig confidence																											.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	S	I	I	T	Q	K	I	I	A	K	A	F	K	D	L	M	Q	S	N	A	Y	H	Q	I	S	V	S	D	I	M	Q	T	A	K	I	R	R	Q	T	F	Y	N	Y	F	Q	N	Q	E	E	L	L	S	W	I	F	E	N	D	F	A	E	L	I	N	D	N	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S																	S		G	G	G											T	S		G	G	G	G	G	G	T		S	S																		T	S	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I
Query Conservation
Alig confidence		.	.	.																				.	.	.	.	.	.																																				.	.	.	.
Template Conservation		.	.	.																				.	.	.	.	.	.																																				.	.	.	.
Template Sequence		.	.	.	S	D	Y	Y	G	W	Q	N	E	L	L	L	L	L	R	Y	L	D	E	.	.	.	.	.	.	N	Q	I	F	Y	Q	K	I	F	V	I	D	K	N	F	E	H	F	F	L	I	Q	W	E	N	L	L	D	K	V	I	F	D	Q	E	.	.	.	.	K	K	S	D	Y	H	W	S	D	L	E	K	S
Template Known Secondary structure		.	.	.			S	S																.	.	.	.	.	.	T												T	T																						.	.	.	.			S
Template Predicted Secondary structure		.	.	.																				.	.	.	.	.	.																																				.	.	.	.
Template SS confidence
					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	T	H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		F	I	C	R	Y	N	A	A	A	I	C	A	I	T	R	E	S	I	I	R	.	.	.	.	.	.	G	N	S	L	E	K	L	Y	S	Q	I	V	N	L	L	L	A	Q	I	K	I	F
Template Known Secondary structure																						.	.	.	.	.	.	T			S	G	G	G														T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions