Job Description P0ACU0 Confidence 99.75% Date Thu Jan 5 11:19:02 GMT 2012 Rank 70 Aligned Residues 185 % Identity 15% Template c2ibdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:possible transcriptional regulator; PDBTitle: crystal structure of probable transcriptional regulatory protein2 rha5900 Resolution 1.50 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence																						.																																																							.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	R	T	E	L	L	D	I	A	A	T	L	F	A	E	R	G	L	R	A	T	T	V	R	D	I	A	D	A	A	G	I	L	S	G	S	L	Y	H	H	F	D	S	K	E	S	X	V	D	E	I	L	R	G	F	L	D	D	L	F	G	K	Y	R	E	I	V	A	S	G	L	D	S	R	A	.	.	.	.	.
Template Known Secondary structure																			S	T	T											T	S							T	T		S																											T	T						.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Query Conservation
Alig confidence		.	.	.	.	.	.																																								.
Template Conservation		.	.	.	.	.	.																																								.
Template Sequence		.	.	.	.	.	.	T	L	E	A	L	V	T	T	S	Y	E	A	I	D	A	S	H	S	A	V	A	I	Y	Q	D	E	V	K	H	L	V	A	N	E	R	F	T	Y	L	.	S	E	L	N	T	E	F	R	E	L	W	X	G	V	L	E	A	G	V	K	D	G	S	F	R	S	D	I	D	V	E	L	A	F
Template Known Secondary structure		.	.	.	.	.	.																S										T		G	G	G	T	T	S	G	G	G	T			.																					T	T	S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.																																								.
Template SS confidence
								90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G	L	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.
Template Sequence		R	F	L	R	D	T	A	W	V	A	.	.	.	.	.	.	.	.	.	.	V	R	W	Y	R	P	G	G	S	V	T	V	D	T	V	A	K	Q	Y	L	S	I	V	L	D	G	L	A
Template Known Secondary structure								S	S	G	G	.	.	.	.	.	.	.	.	.	.	G	G	T			T	T	S	S	S																	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.											.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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