Job Description P0ACU0 Confidence 99.79% Date Thu Jan 5 11:19:02 GMT 2012 Rank 45 Aligned Residues 191 % Identity 19% Template c2hytA_ PDB info PDB header:transcription Chain: A: PDB Molecule:tetr-family transcriptional regulator; PDBTitle: crystal structure of a tetr-family transcriptional regulator (eca1819)2 from pectobacterium atrosepticum at 1.64 a resolution Resolution 1.64 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	M	T	I	K	G	E	Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		R	T	R	A	E	X	E	E	T	R	A	T	L	L	A	T	A	R	K	V	F	S	E	R	G	Y	A	D	T	S	X	D	D	L	T	A	Q	A	S	L	T	R	G	A	L	Y	H	H	F	G	D	K	K	G	L	L	A	A	V	V	E	Q	I	D	A	E	X	D	E	R	L	Q	A	I	S	D	T	A	E	D
Template Known Secondary structure																											T	T	T											T			T	T							S	S																												S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	Q	P	Q	P	D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Sequence		D	W	E	.	.	.	.	.	.	.	.	.	.	.	G	F	R	C	R	C	R	A	Y	L	E	X	A	L	E	P	E	I	Q	R	I	V	L	R	D	A	R	A	V	L	G	G	A	S	.	.	.	.	.	.	P	D	S	Q	R	H	C	V	E	S	X	Q	R	L	I	D	N	L	I	R	Q	G	V	V	A	E
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.												G	G	G	S							T	T	T								S	S		.	.	.	.	.	.																					T	T	S	B		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template SS confidence
		84	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120							.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	I	L	H	T	H	A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G	L	S	Q	R	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	P	Q	A	L	A	S	L	I	Y	G	S	L	A	E	A	A	F	W	I	A	E	.	.	.	.	.	.	.	.	.	.	G	E	D	G	N	A	R	L	A	Q	G	V	A	A	L	E	L	L	L	R	G	L	L	V	K	P
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.		S																			T	T	B	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions