Job Description P0ACU0 Confidence 60.56% Date Thu Jan 5 11:19:02 GMT 2012 Rank 344 Aligned Residues 38 % Identity 11% Template c2h8rA_ PDB info PDB header:transcription activator/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product Resolution 3.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.		.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	A	L	A	Q	F	G	E	Y	G	M	.	N	A	.	T	T	R	E	I	A	A	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	I	A	A	I	T	Y	Y	F	G	S	K
Query Conservation															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	I	L	Y	Q	A	Y	D	R	Q	K	N	P	S	K	E	E	R	E	A	L	V	E	E	C	N	R	A	E	C	L	Q	R	G	V	S	P	S	K	A	H	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W	F	A	N	R
Template Known Secondary structure													S	S																					T	T			S	T	T	G	G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions