Job Description P0ACU0 Confidence 99.79% Date Thu Jan 5 11:19:02 GMT 2012 Rank 48 Aligned Residues 186 % Identity 14% Template c2genA_ PDB info PDB header:transcription Chain: A: PDB Molecule:probable transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a probable2 transcriptional regulator from pseudomonas aeruginosa pao1 Resolution 1.70 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P	D
Query Conservation																						.
Alig confidence																						.																																																							.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		R	K	D	E	I	L	Q	A	A	L	A	C	F	S	E	H	G	V	D	A	T	T	I	E	X	I	R	D	R	S	G	A	S	I	G	S	L	Y	H	H	F	G	N	K	E	R	I	H	G	E	L	Y	L	A	G	I	G	Q	Y	A	A	L	L	E	A	G	F	A	R	A	R	S	A	E	E	.	.	.	.	.
Template Known Secondary structure																			T	T	T																					T		S																													S				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H	A
Query Conservation
Alig confidence		.	.	.	.	.	.																																								.
Template Conservation		.	.	.	.	.	.																																								.
Template Sequence		.	.	.	.	.	.	T	V	R	L	L	V	T	S	Y	I	D	W	V	V	A	N	P	D	W	A	R	F	I	L	H	S	R	G	R	V	E	A	G	E	L	G	E	R	L	.	R	A	D	N	Q	A	H	F	A	R	I	H	A	A	L	A	G	Y	R	A	E	G	L	F	R	E	X	P	D	D	C	F	A	S
Template Known Secondary structure		.	.	.	.	.	.																																	S	T	T					.																					T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.																																								.
Template SS confidence
								81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L	Q	G	L	S	Q
Query Conservation
Alig confidence								.	.	.	.																				.	.	.	.	.	.
Template Conservation								.	.	.	.																				.	.	.	.	.	.
Template Sequence		V	V	I	G	P	A	.	.	.	.	H	D	L	A	R	Q	W	L	A	G	R	T	R	V	A	L	A	D	C	.	.	.	.	.	.	R	E	L	L	A	Q	V	A	W	D	S	V	R	A
Template Known Secondary structure								.	.	.	.									T	T			S	S		G	G	G	G	.	.	.	.	.	.													B
Template Predicted Secondary structure								.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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