Job Description P0ACU0 Confidence 99.78% Date Thu Jan 5 11:19:02 GMT 2012 Rank 61 Aligned Residues 185 % Identity 16% Template c2g3bB_ PDB info PDB header:transcription Chain: B: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of putative tetr-family transcriptional regulator2 from rhodococcus sp. Resolution 2.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		Q	A	K	K	Q	L	I	A	A	A	L	A	Q	F	G	E	Y	G	M	N	A	.	T	T	R	E	I	A	A	Q	A	G	Q	N	I	A	A	I	T	Y	Y	F	G	S	K	E	D	L	Y	L	A	C	A	Q	W	I	A	D	F	I	G	E	Q	F	R	P	H	A	E	E	A	E	R	L	F	A	Q	P	Q	P
Query Conservation																							.
Alig confidence																							.																																																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		E	R	R	D	A	I	L	K	A	S	A	T	A	I	A	Q	R	G	I	R	G	L	R	V	N	D	V	A	E	V	A	G	V	S	P	G	L	L	Y	Y	H	F	K	D	R	I	G	L	L	E	A	A	L	N	Y	I	N	D	R	A	R	A	Y	R	S	E	G	E	G	S	G	D	S	A	R	D	R	.	.	.
Template Known Secondary structure																				S	T	T											T	S										S	S																						T	T			T	T							.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	A	A	I	R	E	L	I	L	R	A	C	R	N	M	I	K	L	L	T	Q	D	D	T	V	N	L	S	K	F	I	S	R	E	Q	L	S	P	T	A	A	Y	H	L	V	H	E	Q	V	I	S	P	L	H	S	H	L	T	R	L	I	A	A	W	T	G	C	D	A	N	D	T	R	M	I	L	H	T	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	T	R	S	L	L	G	E	I	Q	D	R	P	E	V	V	E	N	S	L	A	W	N	E	L	R	A	S	A	V	Y	E	E	A	L	R	D	P	L	A	R	T	T	A	A	W	V	S	E	I	A	D	A	I	V	Q	A	Q	A	T	G	E	I	S	R	S	L	D	P	Q	P	T
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T			S	S																	T	T	T		G	G	G																										T	S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	G	E	I	L	A	F	R	L	G	K	E	T	I	L	L	R	T	G	W	T	A	F	D	E	E	K	T	E	L	I	N	Q	T	V	T	C	H	I	D	L	I	L
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		A	V	T	X	T	A	L	V	E	G	L	S	G	R	W	L	.	.	.	.	.	.	.	.	C	K	E	I	S	T	E	D	A	R	S	H	L	L	G	A	I	D	V	V	X
Template Known Secondary structure																		.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions