Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACU0
Confidence72.04%DateThu Jan 5 11:19:02 GMT 2012
Rank243Aligned Residues38
% Identity8%Templatec2da2A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the second homeobox domain of at-2 binding transcription factor 1 (atbf1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30 .. .......40.........50.....
Predicted Secondary structure 
..





Query SS confidence 












.

.






















Query Sequence  IAAALAQFGEYGM. NA. TTREIAAQAGQNIAAITYYFGSK
Query Conservation 
 

  
  
 
 .  .
   

  



   

  
 

Alig confidence 












.

.






















Template Conservation     

  
  
  
       

    
   

  

 

Template Sequence  LRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNA
Template Known Secondary structure 
SS

S


Template Predicted Secondary structure 







Template SS confidence 







































   1920.........30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions