Job Description P0ACU0 Confidence 45.82% Date Thu Jan 5 11:19:02 GMT 2012 Rank 438 Aligned Residues 38 % Identity 11% Template c1ic8B_ PDB info PDB header:transcription/dna Chain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.		.	.	.	.	.	.	.	40	.	.																						.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	A	L	A	Q	F	G	E	Y	G	M	.	N	A	.	T	T	R	E	I	A	A	Q	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	I	A	A	I	T	Y	Y	F	G	S	K
Query Conservation															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	I	L	F	Q	A	Y	E	R	Q	K	N	P	S	K	E	E	R	E	T	L	V	E	E	C	N	R	A	E	C	I	Q	R	G	V	S	P	S	Q	A	Q	G	L	G	S	N	L	V	T	E	V	R	V	Y	N	W	F	A	N	R
Template Known Secondary structure											S																								T	S				T	T			T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions