Job Description P76486 Confidence 17.29% Date Thu Jan 5 12:23:32 GMT 2012 Rank 75 Aligned Residues 59 % Identity 19% Template c3qkyA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane assembly lipoprotein yfio; PDBTitle: crystal structure of rhodothermus marinus bamd Resolution 2.15 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		L	F	R	V	A	R	K	C	L	S	T	G	R	L	D	D	A	L	P	L	L	Q	R	A	T	E	Q	L	P	E	V	S	E	Y	.	.	.	W	L	A	L	A	I	Q	Y	R	R	C	K	K	T	E	A	A	A	Q	A	A	L	N	A	Y
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.
Template Conservation
Template Sequence		A	F	E	R	A	M	E	F	Y	N	Q	G	K	Y	D	R	A	I	E	Y	F	K	A	V	F	T	Y	G	R	T	H	E	W	A	A	D	A	Q	F	Y	L	A	R	A	Y	Y	Q	N	K	E	Y	L	L	A	A	S	E	Y	E	R	F	I
Template Known Secondary structure												T	T													G	G	G		S		S	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions