Job Description P76486 Confidence 22.35% Date Thu Jan 5 12:23:32 GMT 2012 Rank 68 Aligned Residues 56 % Identity 16% Template c3ikoC_ PDB info PDB header:structural protein, protein transport Chain: C: PDB Molecule:nucleoporin nup84; PDBTitle: crystal structure of the heterotrimeric sec13-nup145c-nup842 nucleoporin complex Resolution 3.20 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		E	V	N	D	D	D	P	H	E	N	G	I	S	I	.	.	.	E	D	Q	D	F	A	A	N	L	F	R	V	A	R	K	C	L	S	T	G	R	L	D	D	A	L	P	L	L	Q	R	A	T	E	Q	L	P	E	V	S	E	Y	W	L	A	L	A	I	Q
Query Conservation																.	.	.
Alig confidence																.	.	.																																.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		S	C	D	L	D	F	P	L	R	E	N	T	N	V	L	D	V	K	D	K	E	E	D	H	I	F	F	K	Y	I	Y	E	L	I	L	A	G	A	I	D	E	A	L	E	E	A	K	L	.	.	.	.	.	.	.	S	D	N	I	S	I	C	M	I	L	C
Template Known Secondary structure				S	T	T					S		G	G	G	S																					T	T												.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions