Job Description P76486 Confidence 86.93% Date Thu Jan 5 12:23:32 GMT 2012 Rank 8 Aligned Residues 125 % Identity 23% Template c2r5sB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp0806; PDBTitle: the crystal structure of a domain of protein vp0806 (unknown function)2 from vibrio parahaemolyticus rimd 2210633 Resolution 2.14 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	V	A	R	K	C	L	S	T	G	R	L	D	D	A	L	P	L	L	Q	R	A	T	E	Q	L	P	E	V	S	E	Y	W	L	A	L	A	I	Q	Y	R	R	C	K	K	T	E	A	A	A	Q	A	A	L	N	A	Y	L	G	N	W	A	F	G	V	P	D	N	K	V	I	H	L	L	S	Q	A	A
Query Conservation
Alig confidence																																																								.	.	.	.	.
Template Conservation																																																								.	.	.	.	.
Template Sequence		L	L	K	Q	V	S	E	L	L	Q	Q	G	E	H	A	Q	A	L	N	V	I	Q	T	L	S	D	E	L	Q	S	R	G	D	V	K	L	A	K	A	D	C	L	L	E	T	K	Q	F	E	L	A	Q	E	L	.	.	.	.	.	L	A	T	I	P	L	E	Y	Q	D	N	S	Y	K	S	L	I	A	K	L	E
Template Known Secondary structure												T	T												S						T	S														T	T									.	.	.	.	.		T	T			G	G	G
Template Predicted Secondary structure																																																								.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	N	F	Q	D	D	P	V	I	Q	C	I	K	E	Q	G	L	D	L	S	F	G	G	T	K	E	N	N	N	Y	P	L	M	Q	M	C	V	D	T	Y	F	A	Q	R	K	P	L	Q	A	L	T	L	L	H	N
Query Conservation
Alig confidence																				.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		L	H	Q	Q	A	A	E	S	P	E	L	K	R	L	E	Q	E	L	.	.	.	.	.	.	.	A	A	N	P	D	N	F	E	L	A	C	E	L	A	V	Q	Y	N	Q	V	G	R	D	E	E	A	L	E	L	L	W	N
Template Known Secondary structure							T	S												.	.	.	.	.	.	.				T	T															T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.								210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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