 |
Job Description | P0AD03 | Confidence | 20.96% | Date | Thu Jan 5 11:19:33 GMT 2012 |
Rank | 204 | Aligned Residues | 46 |
% Identity | 24% | Template | c4a17Y_ |
PDB info |
PDB header:ribosome | Chain: Y: PDB Molecule:rpl37a; |
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
|
Resolution | 3.52 Å |
|
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | P | Q | C | D | M | L | F | S | L | P | E | I | N | S | H | Q | S | A | Y | C | P | R | C | Q | A | K | I | R | D | G | R | D | W | S | L | T | R | L | A | A | M | A | F | T | M | L | L |
Query Conservation |   |
  |
|   |   |
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
| . |
|   |   |
|
|
|   |   |   |
|
|
| . |   |
|
|
|
|
|   |   |   | . |
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |
|
Template Sequence |   |
G | C | P | F | C | G | . |
K | V | A | V | K | R | A | A | V | G | I | W | . |
K | C | K | P | C | K | K | I | I | . |
A | G | G | A | W | E | L | T | T | P | P | A | V | T | A | K | T | T | M |
Template Known Secondary structure |   |
 |
| T | T | T |
| . |
|  |  |  |  |  |  |  | T | T |  |  | . |  |  | T | T | T | T |  |  |  | . |  |
|
| S | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  | . |  |
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
38 | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|