|   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
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40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
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. | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |
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| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
K | K | H | I | Y | L | F | C | S | A | G | . |
M | S | T | S | L | L | V | S | K | M | R | A | Q | A | E | K | Y | E | V | P | V | I | I | E | A | F | . |
. |
. |
P | E | T | L | A | G | E | K | G | Q | N | A | D | V | V | L | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | Q | I | A | Y | M | L | P | E | I | Q | R |
Query Conservation |   |
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|   |
|   |   |
| . |   |
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|   |
|   |   |
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|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
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| . | . | . | . | . | . | . | . | . |
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|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
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| . |
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| . | . | . |
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| . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |
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|   |
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|   |
|   |   |
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|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |
Template Sequence |   |
T | N | K | V | V | I | F | Y | D | S | M | W | H | S | T | E | K | M | A | R | V | L | A | E | S | F | R | D | E | G | C | T | V | K | L | M | W | C | K | A | C | H | H | S | Q | I | M | S | E | I | S | D | A | G | A | V | I | V | G | S | P | T | H | N | N | G | I | L | P | Y | V | A | G | T | L | Q | Y | I | K | G |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  |
|
|
| B | T | T | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
  |   |
70 | |
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 | . |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
| . |
|
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|
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|
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|
|
Query Sequence |   |
L | . |
L | P | N | K | P | V | E | V | I | D | S | L | L | Y | G | K | V | D | G | L | G | V | L | K | A | A | V | A | A | I | K | K | A | A | A | N |
Query Conservation |   |
  | . |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   | . | . |
|   |
|   |   |   |   | . | . |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
L | R | P | Q | N | K | I | G | G | A | F | G | . |
. |
S | F | G | W | S | G | E | . |
. |
S | T | K | V | L | A | E | W | L | T | G | M | G | F | D |
Template Known Secondary structure |   |
T |
|
|
| S |
|  |  |  |  |  |  | . | . |  |  | S | S | S |
|  | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  | . | . |
|
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
332 | . | . | . | . | . | . | . | 340 | . | . | . | |
|
. | . | . | . | . | . | 350 | |
|
. | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . |
  |