|   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | C | S | A | G | M | S | T | S | L | L | V | S | . |
K | M | R | A | Q | A | E | K | Y | E | V | P | V | I | I | E | A | F | P | E | T | L | A | . |
. |
. |
. |
. |
G | E | K | G | Q | N | A | D | V | V | L | L | G | P | Q | I | A | Y | M | L | P | E | I | Q | R | L | L | P | N | K | P | V | E | V | I | D | S | L |
Query Conservation |   |
  |
|   |   |
|   |
|
|
|   |
|   |   | . |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|   |   |
|   |
|   |   | . | . | . |
|
|   |
|
|   |
|   |   |   |   |
| . |
Template Sequence |   |
A | C | P | M | G | L | A | H | T | F | M | A | A | Q | A | L | E | E | A | A | V | E | A | G | Y | E | V | K | I | E | T | Q | G | A | D | G | I | Q | N | R | L | T | A | Q | D | I | A | E | A | T | I | I | I | H | S | V | A | V | T | P | E | D | N | E | . |
. |
. |
R | F | E | S | R | D | V | Y | E | I | T | L | . |
Template Known Secondary structure |   |
 |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |  |  | T | T |  |  |  | S |
|
|
|  |  |  |  |  |  |
| S |  |  |  |  |  |  | S | S |
|
| T | T | G | G | . | . | . | G | G | T | T | S |
|  |  |  |  |  | T | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . |  |  |
|
|
|  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | G | K | V | D | G | L | G | V | L | K | A | A | V | A | A | I | K | K | A | A |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | D | A | I | K | N | A | A | G | I | I | K | E | I | E | E | M | I | A | S | E | Q |
Template Known Secondary structure |   |
T |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . |
  |