Return to main results Retrieve Phyre Job Id

Job DescriptionP45750
Confidence5.47%DateThu Jan 5 12:03:30 GMT 2012
Rank33Aligned Residues26
% Identity12%Templatec3qhsD_
PDB info PDB header:rna binding proteinChain: D: PDB Molecule:protein hfq; PDBTitle: crystal structure of full-length hfq from escherichia coli
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60
Predicted Secondary structure 












Query SS confidence 

























Query Sequence  LSQWRYQGMVGRGERIIGVIKDGQKK
Query Conservation 
  







      


  


 
Alig confidence 

























Template Conservation 


  
 
 
  

 
 


     
Template Sequence  VNGIKLQGQIESFDQFVILLKNTVSQ
Template Known Secondary structure  SSS

SSSSS
Template Predicted Secondary structure 






Template SS confidence 

























   27..30.........40.........50..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions