Return to main results Retrieve Phyre Job Id

Job DescriptionP45750
Confidence96.68%DateThu Jan 5 12:03:30 GMT 2012
Rank1Aligned Residues75
% Identity21%Templatec2ivwA_
PDB info PDB header:lipoproteinChain: A: PDB Molecule:pilp pilot protein; PDBTitle: the solution structure of a domain from the neisseria2 meningitidis pilp pilot protein.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30... ......40.........50.........60.........70... ......80........
Predicted Secondary structure 
















....






















.



...
Query SS confidence 
















. . . .







































.














. . .
Query Sequence  TGMRDPFKPPEDLCRIS. . . . ELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENG. WTILQLTPDVLTLGT. . .
Query Conservation     






   
   .... 
  







      


  


 



  

 

 
.


 



  


  ...
Alig confidence 
















....





















.
















.














...
Template Conservation     
    

  
 




 
 

 
 


 
       


 .


 
  
  
 


 
 
 
  

   
 
 
 
 
Template Sequence  TDKKGENAPDTKRIKETLEKFSLENMRYVGILKSGQKVSGFIE. AEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIE
Template Known Secondary structure 





S



S

SSGGGGS
TTT
SSS.TT
SSTTTTT
Template Predicted Secondary structure 






















.














Template SS confidence 















































































   70.........80.........90.........100.........110.. .......120.........130.........140........
 
   8990..
Predicted Secondary structure  .



Query SS confidence  .



Query Sequence  . GTNC
Query Conservation  .  

Alig confidence  .



Template Conservation 

 
 
Template Sequence  DSTGN
Template Known Secondary structure 
TTSS
Template Predicted Secondary structure 




Template SS confidence 




   149150...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions