Return to main results Retrieve Phyre Job Id

Job DescriptionP45750
Confidence10.94%DateThu Jan 5 12:03:30 GMT 2012
Rank9Aligned Residues88
% Identity13%Templatec2f1zB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 7; PDBTitle: crystal structure of hausp
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40..... ....50..... ....60.........70.........80.........90........
Predicted Secondary structure 














.....


.
























Query SS confidence 




















. . . . .









.










































Query Sequence  PPEDLCRISELSQWRYQGMVG. . . . . RGERIIGVIK. DGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWL
Query Conservation 

   
    
  







.....      


 . 


 



  

 

 



 



  


    

 
 

 
Alig confidence 




















.....









.











.......























Template Conservation               
 
 


 
 
    


 



      
  


 ....... 
  
    

        

 
 
Template Sequence  EFLQKTDPKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDD. . . . . . . VVSRCTKEEAIEHNYGCTNAYMLV
Template Known Secondary structure  GGBSS

TTS


SSSSS


TTSSS

TT.......

TTTT



Template Predicted Secondary structure 
























.......








Template SS confidence 















































































   435....440.........450.........460.........470.........480... ......490.........500.......
 
   99100.........110.........
Predicted Secondary structure 

















Query SS confidence 




















Query Sequence  WQRQGDTNEAMDSRTTVDADT
Query Conservation 
 
 
                
Alig confidence 




















Template Conservation 
 
              

  
Template Sequence  YIRESKLSEVLQAVTDHDIPQ
Template Known Secondary structure  TTTT



TTSS
Template Predicted Secondary structure 









Template SS confidence 




















   518.520.........530........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions