Return to main results Retrieve Phyre Job Id

Job DescriptionP75898
Confidence100.00%DateThu Jan 5 12:15:49 GMT 2012
Rank11Aligned Residues324
% Identity15%Templated1ezwa_
SCOP infoTIM beta/alpha-barrel Bacterial luciferase-like F420 dependent oxidoreductases
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSR
Query Conservation 
  




                        

  

  


      
                
   





 
 
Alig confidence 











..............



























...........














Template Conservation 
  
  
 
   ..............       
  

  


  
  

    ........... 
   

  
  
  
Template Sequence  VSFGIELLPDDK. . . . . . . . . . . . . . PTKIAHLIKVAEDNGFEYAWICDHYNNY. . . . . . . . . . . SYMGVLTLAAVITSK
Template Known Secondary structure 

TTS
..............TT




TTS
...........
T
SS
Template Predicted Secondary structure 




..............










...........



Template SS confidence 















































































   4.....10..... ....20.........30.........40... ......50........
 
   100....... ..110.........120.........130.........140........ .150.........160.........170
Predicted Secondary structure 
.











........






Query SS confidence 







.








































. . . . . . . .





















Query Sequence  IQIYATAA. TLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMG. . . . . . . . IWPGDDYFSRRYDYLTEYVQVL
Query Conservation 






 .     
  


  



 

 

  



 
    
    
........          
     
 
 

Alig confidence 







.








































........





















Template Conservation 
 


 
       
   
   



 

 

  

 
 
                                  
   

Template Sequence  IKLGPGITNPYTRHPLITASNIATLDWISGGRAIIGMGPGDKATFDKMGLPFPCKIPIWNPEAEDEVGPATAIREVKEVI
Template Known Secondary structure  SSSB
SSSS
TTS
B




T

SS



TB
TT

S


Template Predicted Secondary structure 



























Template SS confidence 















































































   5960.........70.........80.........90.........100.........110.........120.........130........
 
   171........180.........190......... 200.........210.........220.........230.........240........
Predicted Secondary structure 






















..
















Query SS confidence 




























. .
















































Query Sequence  RDLWGTGKSDFKGDFFTMNDCRVSPQPSV. . PMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAE
Query Conservation 
 
         
           
 
  .. 


  

 
  
   

  

                           
Alig confidence 




























..
















































Template Conservation 
 
  
  
   
           
        

  

 

 
   

   
                          
Template Sequence  YQYLEGGPVEYEGKYVKTGTADVKARSIQGSDIPFYMGAQGPIMLKTAGEIANGVLVNASNPKDFEVAVPKIEEGAKEAG
Template Known Secondary structure  TT

B

B
SSBB


B





SSGGGS


S
S

STT
Template Predicted Secondary structure 






































Template SS confidence 















































































   139140.........150.........160.........170.........180.........190.........200.........210........
 
   249250.........260.........270.........280.........290.........300.. .......310.........320.
Predicted Secondary structure 





















.......





Query SS confidence 





















































. . . . . . .


















Query Sequence  QTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGT. . . . . . . DTNVRQMADPTSAVNINMG
Query Conservation               
 
  
 


                               .......                   
Alig confidence 





















































.......


















Template Conservation 
              
    
 
                                                         
Template Sequence  RSLDEIDVAAYTCFSIDKDEDKAIEATKIVVAFIVMGSPDVVLERHGIDTEKAEQIAEAIGKGDFGTAIGLVDEDMIEAF
Template Known Secondary structure 

GGGS


SST

TT

SSTTTTTTT


Template Predicted Secondary structure 





















Template SS confidence 















































































   219220.........230.........240.........250.........260.........270.........280.........290........
 
   322.......330.........340.........350 .........360.........
Predicted Secondary structure 






...


Query SS confidence 




























. . .


















Query Sequence  TLVGSYASVARMLDEVASVPGAEGVLLTF. . . DDFLSGIETFGERIQPLMQ
Query Conservation   





 
 
 
       
 
   
  ...      
  

 



 

Alig confidence 


















.








...


















Template Conservation   





 
   
      .
 
   
           
   
  


 

Template Sequence  SIAGDPDTVVDKIEELLKA. GVTQVVVGSPIGPDKEKAIELVGQEVIPHFK
Template Known Secondary structure 
ST.T


TTB
SSTGGGT
Template Predicted Secondary structure 

.












Template SS confidence 


















































   299300.........310....... ..320.........330.........340........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions