Job Description P75898 Confidence 100.00% Date Thu Jan 5 12:15:49 GMT 2012 Rank 1 Aligned Residues 352 % Identity 22% Template c3sdoB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nitrilotriacetate monooxygenase; PDBTitle: structure of a nitrilotriacetate monooxygenase from burkholderia2 pseudomallei Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		R	L	M	M	K	I	G	V	F	V	P	I	G	.	.	.	N	N	G	W	L	I	S	T	H	A	P	Q	Y	M	P	T	F	E	L	N	K	A	I	V	Q	K	A	E	H	Y	H	F	D	F	A	L	S	M	I	K	L	R	G	F	G	G	K	T	E	F	W	D	H	N	L	E	S	F	T	L	M	A	G	L
Query Conservation															.	.	.
Alig confidence															.	.	.
Template Conservation
Template Sequence		R	K	H	I	H	F	G	V	L	I	Q	G	A	G	A	N	M	N	A	W	K	H	P	S	V	P	P	D	A	S	V	N	F	D	F	Y	V	D	R	A	R	R	A	E	N	A	G	I	A	F	A	F	I	A	D	S	A	Y	V	T	P	K	S	A	P	H	F	L	N	R	F	E	P	I	S	L	L	S	A	L
Template Known Secondary structure													T	T		S	S	T	T	G	G	G	S	T	T	S		T	T	G	G	G															T	T														T	T	S						S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	T	S	R	I	Q	I	Y	A	T	A	A	T	L	T	L	P	P	A	I	V	A	R	M	A	A	T	I	D	S	I	S	G	G	R	F	G	V	N	L	V	T	G	W	Q	K	P	E	Y	E	Q	M	G	I	W	P	G	D	D	Y	F	S	R	R	Y	D	Y	L	T	E	Y	V	Q	V	L	R	D	L
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		A	V	L	T	S	K	I	G	L	V	G	T	M	S	S	S	Y	S	E	P	Y	N	V	A	R	Q	F	A	S	L	D	L	I	S	G	G	R	A	G	W	N	V	V	T	S	S	I	E	G	T	G	K	N	Y	G	R	P	H	.	.	P	D	H	A	Q	R	Y	A	I	A	A	E	H	L	D	V	V	Q	G	L
Template Known Secondary structure			T	T		S	S									S	S	S	S																T	T	S								S	S			T	T	G	G	G	G	T	T		S	S	.	.			S	T	T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		174	.	.																						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		W	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	S	D	F	K	G	D	F	F	T	M	N	D	C	R	V	S	P	Q	P	S	V	P	.	M	K	V	I	C	A	G	Q	S	D	A	G	M	A	F	S	A	R	Y	A	D	F	N	F	C	F	G	K	G	V	N
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		W	D	S	W	D	D	D	A	L	V	R	D	R	A	T	G	R	F	F	D	P	D	K	L	H	R	L	D	H	R	G	R	F	F	S	V	E	G	P	L	N	I	R	R	S	P	Q	G	Q	P	V	I	F	Q	A	G	S	S	D	D	G	I	D	L	A	G	R	S	A	D	A	V	F	S	N	G	S	T	F	D
Template Known Secondary structure			T	S	B		T	T					B	T	T	T	T	B				G	G	G	B								S	S								S	S			B	T	T	B	S									S												S							S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	T	A	F	A	P	T	A	A	R	M	K	Q	A	A	E	Q	T	G	R	D	V	G	S	Y	V	L	F	M	V	I	A	D	E	T	D	D	A	A	R	A	K	W	E	H	Y	K	A	G	A	D	E	E	A	L	S	W	L	T	E	Q	S	Q	K	D	T	R	S	G	T	D	T	N	V	R	Q	M	A	D
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		E	A	R	V	F	Y	R	R	V	K	A	A	A	A	A	A	G	R	N	P	D	H	V	K	V	F	P	G	I	G	P	I	V	G	A	T	Q	Q	E	A	D	D	K	Y	R	Q	V	R	D	L	L	S	P	R	E	A	L	A	Y	L	S	H	F	F	Q	Q	H	D	F	S	V	L	R	E	V	A	Y	E	G	.
Template Known Secondary structure																	T	T	S		G	G	G	S												S	S													T	T	S													T	T	T			T	T										.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	S	A	V	N	I	N	M	G	T	L	V	G	S	Y	A	S	V	A	R	M	L	D	E	V	A	S	V	P	G	A	E	G	V	L	L	T	F	D	D	F	L	S	G	I	E	T	F	G	E	R	I	Q	P	L	M	Q	C	R	A	H	L	P	A	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	T	S	E	A	F	I	G	T	P	E	A	V	A	S	E	M	I	R	W	V	D	E	G	A	A	D	G	F	M	L	G	L	P	V	T	G	F	G	L	D	D	F	V	D	H	V	L	P	V	L	S	A	R	G	Y	F	D	P	V	R
Template Known Secondary structure		.	.	.	.	.	.	.		T	T	T	T																	T	T	S		S							S	S	T	T										T							T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions