Job Description P75898 Confidence 100.00% Date Thu Jan 5 12:15:49 GMT 2012 Rank 10 Aligned Residues 315 % Identity 17% Template c1z69D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:coenzyme f420-dependent n(5),n(10)- PDBTitle: crystal structure of methylenetetrahydromethanopterin2 reductase (mer) in complex with coenzyme f420 Resolution 2.61 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	G	V	F	V	P	I	G	N	N	G	W	L	I	S	T	H	A	P	Q	Y	M	P	T	F	E	L	N	K	A	I	V	Q	K	A	E	H	Y	H	F	D	F	A	L	S	M	I	K	L	R	G	F	G	G	K	T	E	F	W	D	H	N	L	E	S	F	T	L	M	A	G	L	A	A	V	T	S	R
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	F	G	I	E	F	V	P	S	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	I	A	Y	Y	A	K	L	S	E	Q	Q	G	F	D	H	V	W	I	T	D	H	Y	N	N	R	.	.	.	.	.	.	.	.	.	.	.	D	V	Y	S	T	L	T	V	L	A	L	N	T	N	S
Template Known Secondary structure										T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T		S								T	T	S	S	.	.	.	.	.	.	.	.	.	.	.												T		S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.															.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40												.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
		100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		I	Q	I	Y	A	T	A	A	.	T	L	T	L	P	P	A	I	V	A	R	M	A	A	T	I	D	S	I	S	G	G	R	F	G	V	N	L	V	T	G	W	Q	K	P	E	Y	E	Q	M	G	I	W	P	G	D	D	Y	F	S	R	R	Y	D	Y	L	T	E	Y	V	Q	V	L	R	D	L	W	G	T	G	K
Query Conservation										.
Alig confidence										.																																	.												.	.	.	.	.
Template Conservation																																											.												.	.	.	.	.
Template Sequence		I	K	I	G	P	G	V	T	N	S	Y	T	R	N	P	A	I	T	A	S	S	I	A	S	I	A	E	I	S	G	G	R	A	V	L	G	L	G	P	G	D	.	K	A	T	F	D	A	M	G	I	A	W	.	.	.	.	.	K	K	P	L	A	T	T	K	E	A	I	Q	A	I	R	D	F	I	S	G	K	K
Template Known Secondary structure		S					S				S	S	S	S																	T	S		B									.								T				.	.	.	.	.																			T	T
Template Predicted Secondary structure																																											.												.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	F	K	G	D	F	F	T	M	N	D	C	R	V	S	P	Q	P	S	V	P	M	K	V	I	C	A	G	Q	S	D	A	G	M	A	F	S	A	R	Y	A	D	F	N	F	C	F	G	K	G	V	N	T	P	T	A	F	A	P	T	A	A	R	M	K	Q	A	A	E	Q	T	G	R	D	V	G	S	Y	V
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		V	S	M	D	G	E	M	I	K	F	A	G	A	K	L	A	F	K	A	.	G	N	I	P	I	Y	M	G	A	Q	G	P	K	M	L	E	L	A	G	E	I	A	D	G	V	L	I	N	A	S	H	P	K	D	F	E	V	A	V	E	Q	I	K	K	G	A	E	K	A	G	R	D	P	S	E	V	D	V	T	A
Template Known Secondary structure							S	S									S	S			.											S												S								S																			T			G	G	G	S
Template Predicted Secondary structure																					.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		L	F	M	V	I	A	D	E	T	D	D	A	A	R	A	K	W	E	H	Y	K	A	G	A	D	E	E	A	L	S	W	L	T	E	Q	S	Q	K	D	T	R	S	G	T	D	T	N	V	R	Q	M	A	D	P	T	S	A	V	N	I	N	M	G	T	.	.	.	.	.	.	.	.	L	V	G	S	Y	A	S	V
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	C	F	S	I	D	K	D	P	V	K	A	V	N	A	A	K	V	V	V	A	F	I	V	A	G	S	P	D	L	V	L	E	R	H	G	I	P	V	E	A	K	S	Q	I	G	A	A	I	A	K	G	D	F	G	A	L	M	G	G	L	V	T	P	Q	M	I	E	A	F	S	I	C	G	T	P	D	D	C
Template Known Secondary structure									S	S																	T	T	S								T	T			T	T											T	T							T	T	T	S													S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		A	R	M	L	D	E	V	A	S	V	P	G	A	E	G	V	L	L	T	.	.	.	F	D	D	F	L	S	G	I	E	T	F	G	E	R	I	Q	P	L
Query Conservation																					.	.	.
Alig confidence												.									.	.	.
Template Conservation												.
Template Sequence		M	K	R	I	K	D	L	E	A	I	.	G	V	T	Q	I	V	A	G	S	P	I	G	P	A	K	E	K	A	I	K	L	I	G	K	E	I	I	A	K
Template Known Secondary structure												.	T											S	S	S												T	T	T
Template Predicted Secondary structure												.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions