Email l.a.kelley@imperial.ac.uk Description P0A6P1 Date Thu Jan 5 11:03:37 GMT 2012 Unique Job ID 271ecbe5cb8124ec

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c1efuB_ 100.0 100 PDB header:complex (two elongation factors) Chain: B: PDB Molecule:elongation factor ts; PDBTitle: elongation factor complex ef-tu/ef-ts from escherichia coli 2 c3agqA_ 100.0 100 PDB header:translation,transferase Chain: A: PDB Molecule:elongation factor ts, elongation factor tu 1, linker, q PDBTitle: structure of viral polymerase form ii 3 c3mmpC_ 100.0 100 PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins 4 c1xb2B_ 100.0 29 PDB header:translation Chain: B: PDB Molecule:elongation factor ts, mitochondrial; PDBTitle: crystal structure of bos taurus mitochondrial elongation2 factor tu/ts complex 5 c1aipG_ 100.0 53 PDB header:complex of two elongation factors Chain: G: PDB Molecule:elongation factor ts; PDBTitle: ef-tu ef-ts complex from thermus thermophilus 6 d1efub2 100.0 100 Fold:EF-Ts domain-like Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain Family:Elongation factor Ts (EF-Ts), dimerisation domain 7 d1tfea_ 100.0 53 Fold:EF-Ts domain-like Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain Family:Elongation factor Ts (EF-Ts), dimerisation domain 8 d1efub4 99.9 100 Fold:EF-Ts domain-like Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain Family:Elongation factor Ts (EF-Ts), dimerisation domain 9 d1xb2b2 99.9 24 Fold:EF-Ts domain-like Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain Family:Elongation factor Ts (EF-Ts), dimerisation domain 10 d1xb2b3 99.9 27 Fold:EF-Ts domain-like Superfamily:Elongation factor Ts (EF-Ts), dimerisation domain Family:Elongation factor Ts (EF-Ts), dimerisation domain 11 d1efub3 99.8 100 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 12 d1aipc1 99.8 55 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 13 d1xb2b1 99.8 30 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 14 d2cp9a1 99.7 32 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TS-N domain 15 d1ifya_ 96.7 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 16 c1tr8A_ 96.6 33 PDB header:chaperone Chain: A: PDB Molecule:conserved protein (mth177); PDBTitle: crystal structure of archaeal nascent polypeptide-associated complex2 (aenac) 17 d1wiva_ 96.3 33 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 18 d1vega_ 96.2 21 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 19 c2daiA_ 95.8 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquitin associated domain containing 1; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin associated domain containing 1 (ubadc1) 20 c2dakA_ 95.7 21 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the second uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 21 c2dagA_ not modelled 94.7 21 PDB header:hydrolase Chain: A: PDB Molecule:ubiquitin carboxyl-terminal hydrolase 5; PDBTitle: solution structure of the first uba domain in the human2 ubiquitin specific protease 5 (isopeptidase 5) 22 c1wr1B_ not modelled 94.7 14 PDB header:signaling protein Chain: B: PDB Molecule:ubiquitin-like protein dsk2; PDBTitle: the complex sturcture of dsk2p uba with ubiquitin 23 c2jy5A_ not modelled 94.4 25 PDB header:signaling protein Chain: A: PDB Molecule:ubiquilin-1; PDBTitle: nmr structure of ubiquilin 1 uba domain 24 d1veja1 not modelled 94.3 31 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 25 c2dahA_ not modelled 94.3 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ubiquilin-3; PDBTitle: solution structure of the c-terminal uba domain in the2 human ubiquilin 3 26 c2cpwA_ not modelled 94.1 24 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cbl-interacting protein sts-1 variant; PDBTitle: solution structure of rsgi ruh-031, a uba domain from human2 cdna 27 d1whca_ not modelled 94.1 23 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 28 d1oqya1 not modelled 94.1 20 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 29 d2dnaa1 not modelled 93.8 18 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 30 d1wj7a1 not modelled 93.7 37 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 31 c2dnaA_ not modelled 93.7 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:unnamed protein product; PDBTitle: solution structure of rsgi ruh-056, a uba domain from mouse2 cdna 32 d2bwba1 not modelled 93.7 14 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 33 d1veka_ not modelled 93.5 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 34 c2cwbA_ not modelled 93.3 25 PDB header:protein binding Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin 35 d2daha1 not modelled 93.2 26 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 36 d2cpwa1 not modelled 92.9 24 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 37 d1vdla_ not modelled 92.2 35 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 38 d2crna1 not modelled 92.0 21 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 39 c2crnA_ not modelled 91.6 23 PDB header:immune system Chain: A: PDB Molecule:ubash3a protein; PDBTitle: solution structure of the uba domain of human ubash3a2 protein 40 d1v92a_ not modelled 89.7 27 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 41 d2g3qa1 not modelled 89.4 28 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 42 d1oaia_ not modelled 88.2 14 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 43 c2jp7A_ not modelled 85.8 21 PDB header:translation Chain: A: PDB Molecule:mrna export factor mex67; PDBTitle: nmr structure of the mex67 uba domain 44 c2damA_ not modelled 85.4 26 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:etea protein; PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human etea protein 45 c2dalA_ not modelled 85.3 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein kiaa0794; PDBTitle: solution structure of the novel identified uba-like domain2 in the n-terminal of human fas associated factor 1 protein 46 d1go5a_ not modelled 85.1 14 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:TAP-C domain-like 47 c2do6A_ not modelled 84.8 30 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of rsgi ruh-065, a uba domain from human2 cdna 48 c2d9sA_ not modelled 84.4 37 PDB header:ligase Chain: A: PDB Molecule:cbl e3 ubiquitin protein ligase; PDBTitle: solution structure of rsgi ruh-049, a uba domain from mouse2 cdna 49 c3bq3A_ not modelled 82.4 15 PDB header:cell cycle, ligase Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: crystal structure of s. cerevisiae dcn1 50 d1oqya2 not modelled 80.1 13 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 51 c2jnhA_ not modelled 79.1 30 PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase cbl-b; PDBTitle: solution structure of the uba domain from cbl-b 52 d1dd3a2 not modelled 75.9 32 Fold:ClpS-like Superfamily:ClpS-like Family:Ribosomal protein L7/12, C-terminal domain 53 d1ctfa_ not modelled 71.0 23 Fold:ClpS-like Superfamily:ClpS-like Family:Ribosomal protein L7/12, C-terminal domain 54 d2zjq51 not modelled 63.1 30 Fold:ClpS-like Superfamily:ClpS-like Family:Ribosomal protein L7/12, C-terminal domain 55 c2zjq5_ not modelled 63.1 30 PDB header:ribosome Chain: 5: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: interaction of l7 with l11 induced by microccocin binding2 to the deinococcus radiodurans 50s subunit 56 c1giyJ_ not modelled 59.3 32 PDB header:ribosome Chain: J: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: crystal structure of the ribosome at 5.5 a resolution. this2 file, 1giy, contains the 50s ribosome subunit. the 30s3 ribosome subunit, three trna, and mrna molecules are in the4 file 1gix 57 d1z96a1 not modelled 53.8 32 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 58 d1wjia_ not modelled 53.2 25 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 59 d1dv0a_ not modelled 50.6 16 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 60 c3k6gA_ not modelled 46.5 14 PDB header:protein binding Chain: A: PDB Molecule:telomeric repeat-binding factor 2-interacting protein 1; PDBTitle: crystal structure of rap1 and trf2 complex 61 c2ftcF_ not modelled 37.9 29 PDB header:ribosome Chain: F: PDB Molecule:39s ribosomal protein l12, mitochondrial; PDBTitle: structural model for the large subunit of the mammalian mitochondrial2 ribosome 62 d1lgta2 not modelled 30.5 16 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 63 d1wgla_ not modelled 28.2 14 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:CUE domain 64 d2qswa1 not modelled 25.3 46 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 65 c2gya3_ not modelled 25.1 23 PDB header:ribosome Chain: 3: PDB Molecule:50s ribosomal protein l7/l12; PDBTitle: structure of the 50s subunit of a pre-translocational e.2 coli ribosome obtained by fitting atomic models for rna and3 protein components into cryo-em map emd-1056 66 c1zswA_ not modelled 23.1 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:glyoxalase family protein; PDBTitle: crystal structure of bacillus cereus metallo protein from glyoxalase2 family 67 d1fipa_ not modelled 20.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 68 d1zq1a1 not modelled 20.2 38 Fold:Sm-like fold Superfamily:GatD N-terminal domain-like Family:GatD N-terminal domain-like 69 d3dhxa1 not modelled 20.0 23 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 70 c2zi8A_ not modelled 19.5 18 PDB header:oxidoreductase Chain: A: PDB Molecule:probable biphenyl-2,3-diol 1,2-dioxygenase bphc; PDBTitle: crystal structure of the hsac extradiol dioxygenase from m.2 tuberculosis in complex with 3,4-dihydroxy-9,10-3 seconandrost-1,3,5(10)-triene-9,17-dione (dhsa) 71 c3cz6A_ not modelled 18.3 26 PDB header:protein binding Chain: A: PDB Molecule:dna-binding protein rap1; PDBTitle: crystal structure of the rap1 c-terminus 72 c1knfA_ not modelled 18.2 17 PDB header:oxidoreductase Chain: A: PDB Molecule:2,3-dihydroxybiphenyl 1,2-dioxygenase; PDBTitle: crystal structure of 2,3-dihydroxybiphenyl 1,2-dioxygenase complexed2 with 3-methyl catechol under anaerobic condition 73 c2dhyA_ not modelled 17.9 9 PDB header:immune system Chain: A: PDB Molecule:cue domain-containing protein 1; PDBTitle: solution structure of the cue domain in the human cue2 domain containing protein 1 (cuedc1) 74 d1kw3b2 not modelled 16.5 18 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 75 c2xecD_ not modelled 15.7 18 PDB header:isomerase Chain: D: PDB Molecule:putative maleate isomerase; PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris 76 c2kjgA_ not modelled 15.6 22 PDB header:metal binding protein Chain: A: PDB Molecule:archaeal protein sso6904; PDBTitle: solution structure of an archaeal protein sso6904 from2 hyperthermophilic sulfolobus solfataricus 77 c2kc2A_ not modelled 14.9 33 PDB header:structural protein Chain: A: PDB Molecule:talin-1; PDBTitle: nmr structure of the f1 domain (residues 86-202) of the2 talin 78 c3rmuD_ not modelled 14.8 16 PDB header:isomerase Chain: D: PDB Molecule:methylmalonyl-coa epimerase, mitochondrial; PDBTitle: crystal structure of human methylmalonyl-coa epimerase, mcee 79 c3fmyA_ not modelled 14.8 4 PDB header:dna binding protein Chain: A: PDB Molecule:hth-type transcriptional regulator mqsa PDBTitle: structure of the c-terminal domain of the e. coli protein2 mqsa (ygit/b3021) 80 d1zhva2 not modelled 14.7 20 Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like 81 c3c4mD_ not modelled 14.6 43 PDB header:membrane protein Chain: D: PDB Molecule:parathyroid hormone; PDBTitle: structure of human parathyroid hormone in complex with the2 extracellular domain of its g-protein-coupled receptor (pth1r) 82 c3c4mC_ not modelled 14.6 43 PDB header:membrane protein Chain: C: PDB Molecule:parathyroid hormone; PDBTitle: structure of human parathyroid hormone in complex with the2 extracellular domain of its g-protein-coupled receptor (pth1r) 83 c1umqA_ not modelled 14.0 0 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 84 d1umqa_ not modelled 14.0 0 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 85 d2cosa1 not modelled 13.6 37 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 86 c2ei2A_ not modelled 13.4 16 PDB header:oxidoreductase Chain: A: PDB Molecule:1,2-dihydroxynaphthalene dioxygenase; PDBTitle: crystal structure analysis of the 1,2-dihydroxynaphthalene dioxygenase2 from pseudomonas sp. stain c18 87 d2dsya1 not modelled 13.0 33 Fold:TTHA1013/TTHA0281-like Superfamily:TTHA1013/TTHA0281-like Family:TTHA0281-like 88 d1ysra1 not modelled 12.9 13 Fold:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Superfamily:ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Family:Histidine kinase 89 c3nicA_ not modelled 12.7 8 PDB header:hydrolase/dna Chain: A: PDB Molecule:eco29kir; PDBTitle: dna binding and cleavage by the giy-yig endonuclease r.eco29ki2 inactive variant y49f 90 d2flia1 not modelled 12.3 31 Fold:TIM beta/alpha-barrel Superfamily:Ribulose-phoshate binding barrel Family:D-ribulose-5-phosphate 3-epimerase 91 d2qrra1 not modelled 12.0 38 Fold:Ferredoxin-like Superfamily:ACT-like Family:NIL domain-like 92 d1etob_ not modelled 11.8 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 93 c1zwgA_ not modelled 11.7 43 PDB header:hormone Chain: A: PDB Molecule:parathyroid hormone; PDBTitle: succinyl human parathyroid hormone 4-37, nmr, 10 structures 94 d1mpya1 not modelled 11.3 6 Fold:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Superfamily:Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Family:Extradiol dioxygenases 95 d1hsta_ not modelled 11.3 11 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Linker histone H1/H5 96 c1xg2B_ not modelled 11.2 13 PDB header:hydrolase/hydrolase inhibitor Chain: B: PDB Molecule:pectinesterase inhibitor; PDBTitle: crystal structure of the complex between pectin2 methylesterase and its inhibitor protein 97 c1zhvA_ not modelled 11.0 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein atu0741; PDBTitle: x-ray crystal structure protein atu0741 from agobacterium tumefaciens.2 northeast structural genomics consortium target atr8. 98 c3pkwA_ not modelled 10.9 9 PDB header:lyase Chain: A: PDB Molecule:toxoflavin lyase (tfla); PDBTitle: crystal structure of toxoflavin lyase (tfla) bound to mn(ii) 99 c3ey7B_ not modelled 10.7 12 PDB header:oxidoreductase Chain: B: PDB Molecule:biphenyl-2,3-diol 1,2-dioxygenase iii-related PDBTitle: structure from the mobile metagenome of v. cholerae.2 integron cassette protein vch_cass1