 |
Job Description | P0A6P1 | Confidence | 93.34% | Date | Thu Jan 5 11:03:37 GMT 2012 |
Rank | 34 | Aligned Residues | 40 |
% Identity | 25% | Template | c2cwbA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:chimera of immunoglobulin g binding protein g |
PDBTitle: solution structure of the ubiquitin-associated domain of2 human bmsc-ubp and its complex with ubiquitin
|
Resolution | UNK |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | L | V | K | E | L | R | E | R | T | G | A | G | M | M | D | C | K | K | A | L | T | E | A | N | G | D | I | E | L | A | I | E | N | M | R | K | S | G |
Query Conservation |   |
  |   |
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|
|
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |
|
|
|
|   |
|   |   |   |
|
|   |
|
|   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|
Template Sequence |   |
Q | P | Q | L | Q | Q | L | R | D | M | G | I | Q | D | D | E | L | S | L | R | A | L | Q | A | T | G | G | D | I | Q | A | A | L | E | L | I | F | A | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|