Job Description P27254 Confidence 99.80% Date Thu Jan 5 11:43:35 GMT 2012 Rank 25 Aligned Residues 155 % Identity 18% Template c3k53B_ PDB info PDB header:metal transport Chain: B: PDB Molecule:ferrous iron transport protein b; PDBTitle: crystal structure of nfeob from p. furiosus Resolution 2.70 Å

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	.	.	.	.	L	G	G
Query Conservation																																																																											.	.	.	.
Alig confidence																							.	.	.	.	.	.					.													.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.	.	.					.													.	.	.	.	.	.	.	.	.
Template Sequence		K	T	V	A	L	V	G	N	P	N	V	G	K	T	T	I	F	N	A	L	T	.	.	.	.	.	.	G	L	R	Q	.	H	V	G	N	W	P	G	V	T	V	E	K	.	.	.	.	.	.	.	.	.	K	E	G	I	M	E	Y	R	E	K	E	F	L	V	V	D	L	P	G	I	Y	S	L	T	A	H	S
Template Known Secondary structure										T	T	S	S										.	.	.	.	.	.	T	T			.						T	T	S	S				.	.	.	.	.	.	.	.	.								T	T												S				S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.					.													.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	E	L	I	A	R	N	F	I	L	D	G	N	A	D	V	I	V	D	I	V	D	S	T	C	L	M	R	N	L	F	L	T	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	E	M	E	V	K	N	I	I	L	V	L	N	K	F	D	L	L	A	K	I	D	I
Template Known Secondary structure													T	T			S								G	G	G											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			S							T							B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	M	R	K	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	I	P	T	N	A	K	K	G	E	G	V	E	E	L	K	R	M	I	A	L	M	A	E	G
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						B	T	T	T	T	B	T													T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.															140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions