25 c3k53B_ Probab=99.80   E-value=1.9e-17  Score=120.11  Aligned_columns=155  Identities=18%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCC----CCC
Q ss_conf             3999974898998899999999887238860898606767511332233210258888219856998078642----464
Q batch____        55 LRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGH----LGG  130 (331)
Q Consensus        55 ~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~----~~~  130 (331)
                      .+|+|+|.||||||||+|+|+      |.++ .+++.|+||.+.         .......++..+...||||+    ...
T Consensus         4 ~~I~ivG~~n~GKSTLin~L~------~~~~-~v~~~~~tT~~~---------~~~~~~~~~~~~~l~DtpG~~~~~~~~   67 (265)
T c3k53B_           4 KTVALVGNPNVGKTTIFNALT------GLRQ-HVGNWPGVTVEK---------KEGIMEYREKEFLVVDLPGIYSLTAHS   67 (265)
T ss_dssp             EEEEEEECTTSSHHHHHHHHH------TTCE-EEEECTTSSCEE---------EEEEEEETTEEEEEEECCCCSCCCSSS
T ss_pred             CEEEEECCCCCCHHHHHHHHH------CCCC-EECCCCCCEEEE---------EEEEEEECCEEEEEEECCCCCCCCCHH
T ss_conf             659998697799989999983------8983-242778740516---------899999899899999877733356124


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHH
Q ss_conf             14789999999862598099971533215688876518856872257765577765553206983999726467895456
Q batch____       131 ASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNV  210 (331)
Q Consensus       131 ~~~~~~~~~~~~~~~~~d~~iid~~g~~~~~~~~~~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~ivv~NK~D~~~~~~~  210 (331)
                      ...........+..++....+++..+..........                    .......|.++|+||+|.......
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--------------------~~~~~~~~~i~v~nk~D~~~~~~~  127 (265)
T c3k53B_          68 IDELIARNFILDGNADVIVDIVDSTCLMRNLFLTLE--------------------LFEMEVKNIILVLNKFDLLAKIDI  127 (265)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEEEGGGHHHHHHHHHH--------------------HHHTTCCSEEEEEETCCCCCCBCH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH--------------------HHHCCCCCEEEEEECCCCCCHHHH
T ss_conf             568899999974000124035306664416999998--------------------875079958999666446897539


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             8899999999743212201689827987214788989999999999953
Q batch____       211 AIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTA  259 (331)
Q Consensus       211 ~~~~~~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL~~~i~~~~~~  259 (331)
                      ........              .+++.+|+.++.|+++|++.+.+....
T Consensus       128 ~~~~~~~~--------------~~~i~~~~~~~~~~~el~~~i~~~~~~  162 (265)
T c3k53B_         128 KKMRKELG--------------VPVIPTNAKKGEGVEELKRMIALMAEG  162 (265)
T ss_dssp             HHHHHHHT--------------SCEEECBTTTTBTHHHHHHHHHHHHTT
T ss_pred             HHHHHHCC--------------CEEEEECCCCCCCHHHHHHHHHHHHHC
T ss_conf             98874439--------------869980111499989999999998304