Job Description P27254 Confidence 99.73% Date Thu Jan 5 11:43:35 GMT 2012 Rank 42 Aligned Residues 223 % Identity 17% Template c1vmaA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: crystal structure of cell division protein ftsy (tm0570) from2 thermotoga maritima at 1.60 a resolution Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.																																		.	.	.	.	.	.	.
Query SS confidence																			.	.																																		.	.	.	.	.	.	.
Query Sequence		I	N	E	A	T	L	A	E	S	I	R	R	L	R	Q	G	E	.	.	R	A	T	L	A	Q	A	M	T	L	V	E	S	R	H	P	R	H	Q	A	L	S	T	Q	L	L	D	A	I	M	P	Y	C	.	.	.	.	.	.	.	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E
Query Conservation																			.	.																																		.	.	.	.	.	.	.
Alig confidence																			.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	D	E	T	R	E	E	L	E	E	L	L	I	Q	A	D	V	G	V	E	T	T	E	Y	I	L	E	R	L	E	E	K	D	G	D	A	L	E	S	L	K	E	I	I	L	E	I	L	N	F	D	T	K	L	N	V	P	P	E	P	P	F	V	I	M	V	V	G	V	N	G	T	G	K	T	T	S	C	G
Template Known Secondary structure																	T	T														T	T			S														T		S								S	S	S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V
Query Conservation
Alig confidence																					.	.	.																		.	.	.	.													.	.	.
Template Conservation																					.	.	.																		.	.	.	.													.	.	.
Template Sequence		K	L	A	K	M	F	V	D	E	G	K	S	V	V	L	A	A	A	D	.	.	.	T	F	R	A	A	A	I	E	Q	L	K	I	W	G	E	R	V	.	.	.	.	G	A	T	V	I	S	H	S	E	G	A	D	.	.	.	P	A	A	V	A	F	D	A	V	A	H	A	L	A	R	N	K	D	V	V	I	I
Template Known Secondary structure										T	T										.	.	.	T	T																.	.	.	.	T							S	T	T			.	.	.															T	T		S
Template Predicted Secondary structure																					.	.	.																		.	.	.	.													.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.																.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G	L	M	E	V	A	D	L	.	.	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		D	T	A	G	R	L	H	T	K	K	N	L	M	E	E	L	R	K	V	H	R	V	V	K	K	K	I	P	D	A	P	H	E	T	L	L	V	I	D	A	T	T	G	Q	N	G	L	V	Q	A	K	I	F	K	E	A	V	N	V	T	G	I	I	L	T	K	L	D	G	T	A	K	G	G	I	T	L	A	I	A
Template Known Secondary structure								S																G	G	G	T		T	T			S								G	G	G															S										G	G	G		S		T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		R	E	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	K	F	I	G	.	.	V	G	E	K	A	E	D	L
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.							.	.		S	S	S	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		261	.	.	.	.														.	.	.	.	270	.			.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions