42 c1vmaA_ Probab=99.73   E-value=5e-16  Score=111.87  Aligned_columns=223  Identities=17%

Q ss_pred             CCHHHHHHHHHHHHHCC--HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-------CCCEEEEEECCCCCCHHHHHH
Q ss_conf             88789999999999600--898999999985136103799999999875322-------887399997489899889999
Q batch____         2 INEATLAESIRRLRQGE--RATLAQAMTLVESRHPRHQALSTQLLDAIMPYC-------GNTLRLGVTGTPGAGKSTFLE   72 (331)
Q Consensus         2 ~~~~~~~~~~~~l~~~~--~~~l~~~i~~~e~~~~~~~~~~~~~l~~~~~~~-------~~~~~Vai~G~pnaGKSTLln   72 (331)
                      +++..++++.+.|...+  .....+.+..+............+.+.+.....       .++.+|+++|+||+||||++.
T Consensus        31 ~~~~~~~eL~~~Ll~~~v~~~la~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~vi~~~Gp~G~GKTTt~a  110 (294)
T c1vmaA_          31 LDDETREELEELLIQADVGVETTEYILERLEEKDGDALESLKEIILEILNFDTKLNVPPEPPFVIMVVGVNGTGKTTSCG  110 (294)
T ss_dssp             CCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHTCSCCCCCCCSSSCEEEEEECCTTSSHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
T ss_conf             88899999999999769998999999997341315589999999998504321002357896699998068876024899


Q ss_pred             HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             99998872388608986067675113322332102588882198569980786424641478999999986259809997
Q batch____        73 AFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIV  152 (331)
Q Consensus        73 ~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~~~~~~~~~~~~~~~~~d~~ii  152 (331)
                      +|+.++..+|++|++++.|   |+.+++..+.+......    ++++....++..   ......+++..+...++|+++|
T Consensus       111 klA~~~~~~g~~v~li~~D---~~R~gA~eQL~~~a~~~----~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~IlI  180 (294)
T c1vmaA_         111 KLAKMFVDEGKSVVLAAAD---TFRAAAIEQLKIWGERV----GATVISHSEGAD---PAAVAFDAVAHALARNKDVVII  180 (294)
T ss_dssp             HHHHHHHHTTCCEEEEEEC---TTCHHHHHHHHHHHHHH----TCEEECCSTTCC---HHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHCCCCEEEEECC---CCCHHHHHHHHHHHHHH----CCEEEECCCCCC---HHHHHHHHHHHHHHCCCCEEEE
T ss_conf             9999999679948999758---76864799999999761----982897488369---8999999999999779989998


Q ss_pred             CCCCCHHHHHHHHHH---------------CCEEEEECCCCCCHHHHHHHHHHCCCCEE--EEEECCCCCCHHHHHHHHH
Q ss_conf             153321568887651---------------88568722577655777655532069839--9972646789545688999
Q batch____       153 ETVGVGQSETEVARM---------------VDCFISLQIAGGGDDLQGIKKGLMEVADL--IVINKDDGDNHTNVAIARH  215 (331)
Q Consensus       153 d~~g~~~~~~~~~~~---------------~d~~~~v~~~~~~~~~~~~~~~~~~~~~i--vv~NK~D~~~~~~~~~~~~  215 (331)
                      ||+|..+.....+..               .+.+++|+++..+.+...........-.+  +++||.|-....+......
T Consensus       181 DTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~iIlTKlDe~~~~G~~l~~~  260 (294)
T c1vmaA_         181 DTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVNVTGIILTKLDGTAKGGITLAIA  260 (294)
T ss_dssp             EECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHHHHHHHHSCCCEEEEECGGGCSCTTHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHH
T ss_conf             18889878579999999999996303566885399981146878999999999630899769997444788557999999


Q ss_pred             HHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH
Q ss_conf             9999974321220168982798721478898999
Q batch____       216 MYESALHILRRKYDEWQPRVLTCSALEKRGIDEI  249 (331)
Q Consensus       216 ~~~~~l~~~~~~~~~~~~~vv~iSA~~g~Gi~eL  249 (331)
                      .....             ||.+++  +|+++++|
T Consensus       261 ~~~~~-------------Pi~~i~--~Gq~v~Dl  279 (294)
T c1vmaA_         261 RELGI-------------PIKFIG--VGEKAEDL  279 (294)
T ss_dssp             HHHCC-------------CEEEEE--CSSSGGGE
T ss_pred             HHHCC-------------CEEEEE--CCCCCCCC
T ss_conf             98579-------------889996--59984554