Job Description P27254 Confidence 99.50% Date Thu Jan 5 11:43:35 GMT 2012 Rank 112 Aligned Residues 165 % Identity 22% Template c1nijA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yjia; PDBTitle: yjia protein Resolution 2.00 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A
Query Conservation
Alig confidence																												.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		N	P	I	A	V	T	L	L	T	G	F	L	G	A	G	K	T	T	L	L	R	H	I	L	N	E	.	.	Q	H	G	Y	K	I	A	V	I	E	N	E	F	G	E	V	S	V	.	.	.	.	.	.	.	.	.	.	D	D	Q	L	I	G	D	R	A	T	Q	I	K	T	L	T	N	G	C	I	C	C	S	R
Template Known Secondary structure												S	S	S	S	S											S	.	.											S	S			S				.	.	.	.	.	.	.	.	.	.							T	T	S							T	T	S						T
Template Predicted Secondary structure																												.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.												160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.
Predicted Secondary structure													.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence													.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		S	Q	R	A	R	E	L	M	L	L	C	.	.	.	.	.	.	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	.	.	.	.	.	.	.	.	.	.	.	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	.	.	.	G	I	K	K	G	L	M
Query Conservation													.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence													.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation
Template Sequence		S	N	E	L	E	D	A	L	L	D	L	L	D	N	L	D	K	G	N	I	Q	F	D	R	L	V	I	E	C	T	G	M	A	D	P	G	P	I	I	Q	T	F	F	S	H	E	V	L	C	Q	R	Y	L	L	D	G	V	I	A	L	V	D	A	V	H	A	D	E	Q	M	N	Q	F	T	I	A	Q	S	Q	V
Template Known Secondary structure		T	S																T	S				S								T	T													S																		T	T	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S
Query Conservation
Alig confidence																		.	.												.	.	.	.	.	.	.	.	.
Template Conservation																		.	.												.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	A	D	R	I	L	L	T	K	T	D	V	A	G	E	.	.	A	E	K	L	H	E	R	L	A	R	I	.	.	.	.	.	.	.	.	.	N	A	R	A	P	V	Y	T	V	T
Template Known Secondary structure			T		S							T	T	T		S		.	.	T											.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																		.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions