112 c1nijA_ Probab=99.50   E-value=1.6e-12  Score=91.41  Aligned_columns=165  Identities=22%

Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCCCH
Q ss_conf             88739999748989988999999998872388608986067675113322332102588882198569980786424641
Q batch____        52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGA  131 (331)
Q Consensus        52 ~~~~~Vai~G~pnaGKSTLln~L~~~~~~~g~~vaiv~~dp~tt~~~~~~~~~r~~~~~~~~~~~~~i~~~~t~g~~~~~  131 (331)
                      .+-++..|+|+.|||||||+|.|++.  .+|.+++|+.++.|....          -..+....+..+..+.+.+.+|..
T Consensus         1 ~~ipv~iitGfLGaGKTTll~~ll~~--~~~~~~avi~Nefg~~~i----------D~~ll~~~~~~v~~l~~GCiCC~~   68 (317)
T c1nijA_           1 NPIAVTLLTGFLGAGKTTLLRHILNE--QHGYKIAVIENEFGEVSV----------DDQLIGDRATQIKTLTNGCICCSR   68 (317)
T ss_dssp             CCEEEEEEEESSSSSCHHHHHHHHHS--CCCCCEEEECSSCCSCCE----------EEEEECTTSCEEEEETTSCEEECT
T ss_pred             CCCCEEEECCCCCCCHHHHHHHHHHC--CCCCEEEEEEECCCCCCH----------HHHHHHHCCCEEEEECCCCEECCC
T ss_conf             97618998089888988999999842--699738999716644420----------588984079729997799542132


Q ss_pred             HHHHHHHHHHH------HHCCCEEEEECCCCCHH-----------HHHHHHHHCCEEEEECCCCCCHHHH---HHHHHHC
Q ss_conf             47899999998------62598099971533215-----------6888765188568722577655777---6555320
Q batch____       132 SQRARELMLLC------EAAGYDVVIVETVGVGQ-----------SETEVARMVDCFISLQIAGGGDDLQ---GIKKGLM  191 (331)
Q Consensus       132 ~~~~~~~~~~~------~~~~~d~~iid~~g~~~-----------~~~~~~~~~d~~~~v~~~~~~~~~~---~~~~~~~  191 (331)
                      ...+..++..+      .....|.++||+.|...           ....-....+.++.++|+..+....   ......+
T Consensus        69 ~~~~~~~l~~l~~~~~~~~~~~d~i~IE~sG~a~p~~i~~~l~~~~~l~~~~~l~~vi~vvD~~~~~~~~~~~~~~~~Qi  148 (317)
T c1nijA_          69 SNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQV  148 (317)
T ss_dssp             TSCHHHHHHHHHHHHHHTSCCCSEEEEEEETTCCHHHHHHHHHHSHHHHHHEEEEEEEEEEETTTHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_conf             47789999999984125546866899808875798999988630820113089801789974026777663225564453


Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             698399972646789545688999999997432122016898279872
Q batch____       192 EVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCS  239 (331)
Q Consensus       192 ~~~~ivv~NK~D~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vv~iS  239 (331)
                      ..++++++||+|+.+.  .......+...         .+..+++.++
T Consensus       149 ~~Ad~ivlnk~D~~~~--~~~i~~~i~~l---------nP~a~i~~~~  185 (317)
T c1nijA_         149 GYADRILLTKTDVAGE--AEKLHERLARI---------NARAPVYTVT  185 (317)
T ss_dssp             HTCSEEEEECTTTCSC--THHHHHHHHHH---------CSSSCEEECC
T ss_pred             HHCCEEEEECCCCCCH--HHHHHHHHHHH---------CCCCEEEEEE
T ss_conf             1077899605566898--99999999740---------8997799963