Job Description P27254 Confidence 99.58% Date Thu Jan 5 11:43:35 GMT 2012 Rank 88 Aligned Residues 166 % Identity 22% Template c1ni3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ychf gtp-binding protein; PDBTitle: structure of the schizosaccharomyces pombe ychf gtpase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	P	Y	C	G	N	T	L	R	L	G	V	T	G	T	P	G	A	G	K	S	T	F	L	E	A	F	G	M	L	L	I	R	E	G	L	K	V	A	V	I	A	V	D	P	S	S	P	V	T	G	G	S	I	L	G	D	K	T	R	M	N	D	L	A	R	A	E	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		Q	W	G	R	P	G	N	N	L	K	T	G	I	V	G	X	P	N	V	G	K	S	T	F	F	R	A	I	T	.	.	.	.	.	.	K	S	V	L	G	N	P	A	N	Y	P	Y	A	T	I	D	P	.	.	.	.	.	.	.	.	.	E	E	A	K	V	A	V	P	D	E	R	F	D	W	L	C	E	A	Y
Template Known Secondary structure				S	S	S	S	S										S	S	S	S										.	.	.	.	.	.		S	T	T	T	S	T	T			S	S					T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
									117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	F	I	R	P	V	P	S	S	G	H	L	G	G	A	S	Q	R	A	R	E	L	M	L	L	C	E	A	A	G	Y	D	V	V	I	V	E	T	V	G	V	G	Q	S	E	T	E	V	A	R	M	V	D	C	F	I	S	L	Q	I	A	G	G	G	D	D	L	Q	G	I	K	K	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		K	P	K	S	R	V	P	A	F	L	T	V	F	D	I	A	G	L	T	K	G	A	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	G	L	G	N	A	F	L	S	H	V	R	A	V	D	A	I	Y	Q	V	V	R	A	F	D	D	A	E	I	.	.	.	.	.	.
Template Known Secondary structure				S												T	G	G	G						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S									T	T		S											T	T		S	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	M	E	V	A	D	L	I	V	I	N	K	D	D	G	D	N	H	T	N	.	.	.	V	A	I	A	R	H	M	Y	E	S	A	L	H	I	L	R	R	K	Y	D	E	W	Q	P	R	V	L	T	C	S	A	L	E	K	R	G	I	D	E	I	W	H	A	I	I	D	F	K	T	A
Query Conservation																						.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	H	V	E	G	D	V	D	P	I	R	D	L	S	I	I	V	D	E	L	L	I	K	D	A	E	F	V	E	K	H	L	E	G	L	R	K	I	T	S	R	G	A	N	T	L	E	X	K	A	K	K	E	E	Q	A	I	I	E	K	V	Y	Q	Y	L	T	E
Template Known Secondary structure		.	.	.	.	.	.	S			S	S	S	S																															T	T			S	S		S	S	S																				T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions