 |
Job Description | P36979 | Confidence | 50.17% | Date | Thu Jan 5 11:54:07 GMT 2012 |
Rank | 30 | Aligned Residues | 59 |
% Identity | 8% | Template | d2duya1 |
SCOP info | SAM domain-like
| RuvA domain 2-like
| ComEA-like
|
Resolution | 1.75 |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
. | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | T | K | D | G | K | I | N | L | L | D | L | N | R | Q | Q | M | R | E | F | F | K | D | L | G | E | K | P | F | R | A | D | Q | V | M | K | W | M | Y | H | Y | C | C | D | N | F | D | E | M | T | D | I | N | . |
. |
. |
K | V | L | R | G | K | L | K | E | V | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . | . |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
| . | . | . |
|
|
|   |   |   |
|   |   |
|
|   |
| . | . | . |
|   |
|   |
|   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|
Template Sequence |   |
L | P | Q | A | Q | T | P | V | S | L | N | E | A | S | L | E | E | L | X | A | L | P | . |
. |
. |
G | I | G | P | V | L | A | R | R | I | V | E | G | . |
. |
. |
R | P | Y | A | R | V | E | D | L | L | K | V | K | G | I | G | P | A | T | L | E | R | L | R | P | Y | L |
Template Known Secondary structure |   |
|
| G | G | G |
| S |  |  | T | T | T |
|
|  |  |  |  | T | T | S | T | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  | T | . | . | . |
|
|
| S | S | G | G | G | G | G | G | S | T | T |
|
|  |  |  |  |  |  |  | G | G | G |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|