Job Description P36979 Confidence 33.68% Date Thu Jan 5 11:54:07 GMT 2012 Rank 59 Aligned Residues 64 % Identity 23% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.											.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure											.	.	.	.	.	.	.																	.													.							.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.																	.													.							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	L	D	H	V	N	D	G	.	.	.	.	.	.	.	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	.	K	I	N	L	I	P	W	N	P	F	P	G	.	A	P	Y	G	R	S	.	.	.	.	.	.	.	.	.	.	S	N	S	R	I	D	R	F	S	K	V	L	M	S	Y	G	F	T
Query Conservation											.	.	.	.	.	.	.																	.													.							.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																	.													.							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	L	Y	S	F	A	D	S	D	G	D	G	Y	G	D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	L	S	P	I	H	P	C	X	S	Y	H	G	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	G	T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K
Template Known Secondary structure				T	T	T	S			S	S	S	S	S	S								T	T							T	T		S								S		B	S	S	T	T			S	B	S		T	T	S			T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		341	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions