Job Description P36979 Confidence 20.34% Date Thu Jan 5 11:54:07 GMT 2012 Rank 132 Aligned Residues 164 % Identity 12% Template c3gqcB_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna repair protein rev1; PDBTitle: structure of human rev1-dna-dntp ternary complex Resolution 2.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	N	R	Q	Q	M	R	E	F	F	K	D	L	G	E	K	P	F	R	.	.	A	D	Q	V	M	K	W	M	Y	H	Y	C	C	D	N	F	D	E	M	T	D	I	N	K	V	L	R	G	K	L	K	E	V	A	E	I	R	A	P	E	V	V	E	E	Q	R	S	S	D	G	T	I	K	W	A	I	A	V	G
Query Conservation																					.	.
Alig confidence																					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	P	E	E	V	D	D	F	I	R	G	Q	L	V	T	N	L	P	G	V	G	H	S	M	E	S	K	L	A	S	L	G	I	K	T	C	G	D	L	Q	Y	M	T	M	A	K	L	Q	K	E	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	T	G	Q	M	L	Y	R	F	C
Template Known Secondary structure														S	B	G	G	G	S	T	T											T	T	T			B					T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.																	.	.	.	.	.	690	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		D	Q	R	V	E	T	V	Y	I	P	E	D	D	R	A	T	L	C	V	S	S	Q	V	G	C	A	L	E	C	K	F	C	S	T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	L	D	D	R	P	V	R	T	E	K	E	R	K	S	V	S	A	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	G	I	R	F	T	Q	P	K	E	A	E	A	F	L	L	S	L	S	E	E	I	Q	R	R	L	E	A	T	G	M	K	G	K	R	L	T	L	K	I	M	V	R
Template Known Secondary structure		T	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S				S	S																							T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.																.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
												175	.	.	.	.	180													.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		.	.	.	.	.	.	.	.	.	.	M	M	G	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	.	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		K	P	G	A	P	V	E	T	A	K	F	G	G	H	G	I	C	D	N	I	A	R	T	V	T	L	D	Q	A	T	D	N	A	K	I	I	G	K	A	M	L	N	M	F	H	T	M	K	L	N	I	S	D	M	R	G	V	G	I	H	V	N	Q	L	V	P
Template Known Secondary structure			T	T	S		S	S		S	S	T	T				S																														T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions