Job Description P36979 Confidence 59.54% Date Thu Jan 5 11:54:07 GMT 2012 Rank 21 Aligned Residues 157 % Identity 15% Template c3eooL_ PDB info PDB header:lyase Chain: L: PDB Molecule:methylisocitrate lyase; PDBTitle: 2.9a crystal structure of methyl-isocitrate lyase from2 burkholderia pseudomallei Resolution 2.90 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E	P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																	.	.	.	.												.	.	.															.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.																	.	.	.	.												.	.	.
Template Sequence		S	T	M	D	D	V	L	V	D	A	N	R	I	T	N	A	T	.	.	.	.	.	.	.	N	L	P	L	L	V	D	I	D	T	G	W	G	G	A	F	.	.	.	.	N	I	A	R	T	I	R	S	F	I	K	.	.	.	A	G	V	G	A	V	H	L	E	D	Q	V	G	Q	K	R	C	G	H	R	P	G
Template Known Secondary structure																			.	.	.	.	.	.	.		S							T	T		S	S	S			.	.	.	.												.	.	.	T	T		S							B						T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.																	.	.	.	.												.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.								.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
							215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	.	.	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	V	N	D
Query Conservation		.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.																		.	.															.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.								.
Template Conservation																																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.								.
Template Sequence		K	E	C	V	P	A	G	E	M	V	D	R	I	K	A	A	V	D	A	R	T	D	E	T	F	V	I	M	A	R	T	D	A	A	A	A	E	G	.	.	.	.	.	.	.	.	I	D	A	A	I	E	R	A	I	A	Y	V	E	A	G	A	D	.	.	.	.	.	.	.	.	M	I	F	P	E	A	M	.	K
Template Known Secondary structure				B																		S		T	T	S														.	.	.	.	.	.	.	.															T		S	.	.	.	.	.	.	.	.								.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.								.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.		.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	G	R	S	S	N	S	R	I	D	R	F	S	K	V	L	M	S	Y	G	F	T	T	I	V
Query Conservation
Alig confidence														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	D	Y	R	R	F	K	E	A	V	.	K	V	P	I	L	A	N	L	T	E	F	G	S	T	P	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	L	D	E	L	K	G	A	N	V	D	I	A	L
Template Known Secondary structure		S												.		S		B						T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure														.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.													.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions