Job Description P36979 Confidence 20.29% Date Thu Jan 5 11:54:07 GMT 2012 Rank 134 Aligned Residues 188 % Identity 14% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M	G	E	P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	.	.	.	V	P	A	L
Query Conservation																																																																											.	.	.
Alig confidence																															.	.	.	.	.	.	.																				.	.	.	.															.	.	.
Template Conservation																															.	.	.	.	.	.	.																				.	.	.	.
Template Sequence		I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	H	V	R	N	D	D	.	.	.	.	.	.	.	G	T	P	S	S	D	P	D	R	F	A	R	L	T	E	G	L	H	T	.	.	.	.	H	C	P	G	X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R
Template Known Secondary structure			S															T											T	T	.	.	.	.	.	.	.	S																			.	.	.	.		S	T	T									T	T	T			G	G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.										.	.	240	.	.	.	.										.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	.	.	.	.	.	.	.	.	.	N	D	E	I	R	D	E	.	.	.	.	.	.	.	.	.	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M
Query Conservation																				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	X	L	P	L	K	P	D	X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	S	H	I	L	R	A	I	D	X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V
Template Known Secondary structure		G	T	T	G	G	G			S							S					S	S	S																				T								S	S													T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.																												.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	G	R	S	S	N	S	R	I	D	R	F	S	K	V	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	A	X	P	A	D	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	N	Q	L	T	V	N	E	W	A	I	A	A	G	G	H	T	R	T	G	L	E	D	N	I	R	L	D	R	Q	T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C
Template Known Secondary structure		T	T	S																				T	T	S								T	T												T	T						S	T	T	T			B	S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Y	G	F	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	Y	Q	R	P	V
Template Known Secondary structure				T	T			B
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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