Job Description P36979 Confidence 99.94% Date Thu Jan 5 11:54:07 GMT 2012 Rank 3 Aligned Residues 271 % Identity 14% Template c2yx0A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:radical sam enzyme; PDBTitle: crystal structure of p. horikoshii tyw1 Resolution 2.21 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.							.
Predicted Secondary structure																																																														.													.	.	.	.	.	.
Query SS confidence																																																														.													.	.	.	.	.	.
Query Sequence		T	D	I	N	K	V	L	R	G	K	L	K	E	V	A	E	I	R	A	P	E	V	V	E	E	Q	R	S	S	D	G	T	I	K	W	A	I	A	V	G	D	Q	R	V	E	T	V	Y	I	P	E	D	D	R	A	T	L	C	V	S	.	S	Q	V	G	C	A	L	E	C	K	F	C	.	.	.	.	.	.	S
Query Conservation																																																														.													.	.	.	.	.	.
Alig confidence																		.	.																																											.													.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		P	N	M	P	K	E	V	A	E	L	F	R	K	Q	H	Y	.	.	E	I	V	G	R	H	S	G	V	K	L	C	H	W	L	K	K	S	L	T	E	G	R	F	C	Y	K	Q	K	F	Y	G	I	H	S	H	R	C	L	Q	M	T	P	V	L	A	W	C	T	H	N	C	I	F	C	W	R	P	M	E	N	F
Template Known Secondary structure			S	S											T	T		.	.				B	T	T							T	T																					G	G	G						S		S	S			S	B			T	T				S	S	S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		T	A	Q	Q	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	.	.	.	.	.	.	.	.	P	I	T	N	V	V	M	M	G	M	G	E	P	L	L	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.																	.																.	.	.	.	.
Template Conservation																																																													.																.	.	.	.	.
Template Sequence		L	G	T	E	L	P	Q	P	W	D	D	P	A	F	I	V	E	E	S	I	K	A	Q	R	K	L	L	I	G	Y	K	P	K	V	D	K	K	K	F	E	E	A	W	N	P	T	H	A	A	I	S	L	S	G	E	P	M	L	Y	.	P	Y	M	G	D	L	V	E	E	F	H	K	R	G	F	.	.	.	.	.
Template Known Secondary structure		S		S	S			S	S																				T	T					S									T	S								S	S	S		G	G	G	S	.	T	T											T	T		.	.	.	.	.
Template Predicted Secondary structure																																																													.																.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		R	R	V	T	L	S	T	S	G	V	V	P	.	.	.	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L
Query Conservation														.	.	.
Alig confidence		.												.	.	.																																																.	.	.	.
Template Conservation		.																																																														.	.	.	.
Template Sequence		.	T	T	F	I	V	T	N	G	T	I	P	E	R	L	E	E	M	I	K	E	D	K	L	P	T	Q	L	Y	V	S	I	T	A	P	D	I	E	T	Y	N	S	V	N	I	P	M	I	P	D	G	W	E	R	I	L	R	F	L	E	L	M	.	.	.	.	R	D	L	P	T	R	T	V	V	R	L	T	L	V
Template Known Secondary structure		.								S												T	T				S									S	S										B	S	S	S														.	.	.	.	T	T		S	S
Template Predicted Secondary structure		.																																																														.	.	.	.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.					.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																		.	.	.	.
Query SS confidence																								.																																		.	.	.	.
Query Sequence		D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	.	K	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	G	R	S	S	N	S	R	I	D	R	F	S	K	V	L	M	S	Y	.	.	.	.	G	F	T	T	I	V	R	K	T	R
Query Conservation																								.																																		.	.	.	.
Alig confidence							.	.																.										.																								.	.	.	.
Template Conservation							.	.																										.
Template Sequence		K	G	E	N	M	.	.	H	S	P	E	K	Y	A	K	L	I	L	K	A	R	P	M	F	V	E	A	K	A	Y	M	N	.	R	L	T	I	N	N	M	P	S	H	Q	D	I	R	E	F	A	E	A	L	V	K	H	L	P	G	Y	H	I	E	D	E	Y	E	P	S	R
Template Known Secondary structure		T	T	T	T		.	.																S										.				G	G	G	S															T	T		T	T								G	G	G	T
Template Predicted Secondary structure							.	.																										.
Template SS confidence
		247	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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