Job Description P36979 Confidence 99.98% Date Thu Jan 5 11:54:07 GMT 2012 Rank 2 Aligned Residues 277 % Identity 17% Template c2a5hC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:l-lysine 2,3-aminomutase; PDBTitle: 2.1 angstrom x-ray crystal structure of lysine-2,3-aminomutase from2 clostridium subterminale sb4, with michaelis analog (l-alpha-lysine3 external aldimine form of pyridoxal-5'-phosphate). Resolution 2.10 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																		.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	W	M	Y	H	Y	C	C	D	N	F	D	E	M	T	.	.	.	D	I	N	K	V	L	R	G	K	L	K	E	V	A	E	I	R	A	P	E	V	.	.	.	.	.	.	.	V	E	E	Q	R	S	S	D	G	T	I	K	W	A	I	A	V	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	R	W	Q	V	R	N	R	I	E	T	V	E	E	L	K	K	Y	I	P	L	T	K	E	E	E	E	G	V	A	Q	C	V	K	S	L	R	X	A	I	T	P	Y	Y	L	S	L	I	D	P	N	D	P	N	D	P	V	R	K	Q	A	I	P	T	A	L	E	L	N	K	A	A	A	D	L	E	D	P	L	H
Template Known Secondary structure								T		B		S						T	T	S												T		T	T	S					B						T	T	S		T	T		T	T								S			G	G	G	G				T	T		B	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
				102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																					.
Query SS confidence		.	.																																					.
Query Sequence		.	.	Q	R	V	E	T	V	Y	I	P	E	D	D	R	A	T	L	C	V	S	S	Q	V	G	C	A	L	E	C	K	F	C	S	T	A	Q	Q	.	G	F	N	R	N	L	R	V	S	E	I	I	G	Q	V	W	R	A	A	K	I	V	G	A	A	K	V	T	G	Q	R	P	I	T	N	V	V	M	M	G	M
Query Conservation		.	.																																					.
Alig confidence		.	.																																					.																					.	.	.	.	.	.	.	.													.
Template Conservation																																																													.	.	.	.	.	.	.	.													.
Template Sequence		E	D	T	D	S	P	V	P	G	L	T	H	R	Y	P	D	R	V	L	L	L	I	T	D	X	C	S	X	Y	C	R	H	C	T	R	R	R	F	A	G	Q	S	D	D	S	X	P	X	E	R	I	D	K	A	I	D	Y	I	R	.	.	.	.	.	.	.	.	N	T	P	Q	V	R	D	V	L	L	S	G	.
Template Known Secondary structure		T	T	T	S		S	B	T	T					S	S	S								S			S	S			T	T		T	T	T	T	T	T	T	S	S	S	S	B															.	.	.	.	.	.	.	.	T		T	T									.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.													.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.	.	170
		179	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure							.	.	.	.																																											.
Query SS confidence							.	.	.	.																																											.
Query Sequence		G	E	P	L	L	.	.	.	.	N	L	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	G	V	V	P	A	L	D	K	L	G	D	M	.	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N
Query Conservation							.	.	.	.																																											.
Alig confidence							.	.	.	.																																											.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	A	L	L	V	S	D	E	T	L	E	Y	I	I	A	K	L	R	E	I	P	H	V	E	I	V	R	I	G	S	R	T	P	V	V	L	P	Q	R	I	T	P	E	L	V	N	X	L	K	K	Y	H	P	V	W	L	N	T	H	F	N	H	P	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		T	T	S	S													T	T	S	T	T									S						G	G	G											T	T		S									S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	K	.	I	N	L	I	P	W	N	P	F	P	G	A	P	Y	G	R	S	S	N	S	R	I	D	R	F	S	K
Query Conservation																																																						.
Alig confidence		.	.	.																																																		.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	T	E	E	S	T	R	A	C	Q	L	L	A	D	A	G	V	P	L	G	N	Q	S	V	L	L	R	G	V	N	D	C	V	H	V	X	K	E	L	V	N	K	L	V	K	I	R	V	R	P	Y	Y	I	Y	Q	C	D	L	S	L	G	L	E	H	F	R	T	P	V	S	K	G	I	E	I	I	E
Template Known Secondary structure		.	.	.															T	T											T	T	T	T		S														T	T												B	T	T		G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		333	.	.	.	.					.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		V	L	M	S	Y	.	.	.	.	G	F	T	T	I	V	R	K	T	R	G
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		G	L	R	G	H	T	S	G	Y	C	V	P	T	F	V	V	D	A	P	G
Template Known Secondary structure		T	T	T	T	T	S		G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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