Return to main results Retrieve Phyre Job Id

Job DescriptionP36979
Confidence41.18%DateThu Jan 5 11:54:07 GMT 2012
Rank39Aligned Residues77
% Identity25%Templatec1keeH_
PDB info PDB header:ligaseChain: H: PDB Molecule:carbamoyl-phosphate synthetase small chain; PDBTitle: inactivation of the amidotransferase activity of carbamoyl phosphate2 synthetase by the antibiotic acivicin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   293......300.........310.. .......320.........330.........340.........350.....
Predicted Secondary structure 





.................





















Query SS confidence 



















. . . . . . . . . . . . . . . . .










































Query Sequence  HQLAELLKDTPCKINLIPWN. . . . . . . . . . . . . . . . . PFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAAC
Query Conservation    
  


     






.................
  
     

   
  
   
   

 
 

 


 

 


Alig confidence 



















.................





..















...........







Template Conservation   



 
   
  
 


     
 
    






 




..      
  

  
  ........... 






Template Sequence  RNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDP. . APCDYAITAIQKFLET. . . . . . . . . . . DIPVFGIL
Template Known Secondary structure  TT
TT

TT

S


SB
S..TT
TTS...........




Template Predicted Secondary structure 
















..
...........


Template SS confidence 















































































   203......210.........220.........230.........240..... ....250.........260. ........
 
   356 ...360.........370.........380..
Predicted Secondary structure  .





Query SS confidence 
.

























Query Sequence  G. QLAGDVIDRTKRTLRKRMQGEAIDIK
Query Conservation 
.

      
          
      
Alig confidence 
.

























Template Conservation 





 



 
 

  

 
 
 

 
Template Sequence  GHQLLALASGAKTVKMKFGHHGGNHPVK
Template Known Secondary structure  T

Template Predicted Secondary structure 








Template SS confidence 



























   271........280.........290........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions