Job Description P36979 Confidence 33.34% Date Thu Jan 5 11:54:07 GMT 2012 Rank 61 Aligned Residues 91 % Identity 13% Template c1cmwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (dna polymerase i); PDBTitle: crystal structure of taq dna-polymerase shows a new2 orientation for the structure-specific nuclease domain Resolution 2.60 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L	H	A	P	N	D	E	I	R	D	E	I	V	P	.	.	.	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	V	N	D	G	T	E
Query Conservation																																				.	.	.
Alig confidence																																				.	.	.																													.	.	.	.							.
Template Conservation																																																																			.	.	.	.							.
Template Sequence		G	F	A	K	S	L	L	K	A	L	K	E	D	G	D	A	V	I	V	V	F	D	A	K	A	P	S	F	R	H	E	A	Y	G	G	Y	K	A	G	R	A	P	T	P	E	D	F	P	R	Q	L	A	L	I	K	E	L	V	D	L	L	G	L	A	R	.	.	.	.	L	E	V	P	G	Y	.	E	A	D	D
Template Known Secondary structure																S									S	S	S		T	T	G	G	G	G	S	T	T	T	S							S	S															T	T				.	.	.	.				T	T	S	.
Template Predicted Secondary structure																																																																			.	.	.	.							.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.		.	.	.	120
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	H	Q	L	A	E	L	L	K	D	T	P	C	K	I	N	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	A	S	L	A	K	K	A	E	K	E	G	Y	E	V	R	I	L
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions