Job Description P36979 Confidence 24.31% Date Thu Jan 5 11:54:07 GMT 2012 Rank 106 Aligned Residues 64 % Identity 19% Template c1bagA_ PDB info PDB header:alpha-amylase Chain: A: PDB Molecule:alpha-1,4-glucan-4-glucanohydrolase; PDBTitle: alpha-amylase from bacillus subtilis complexed with2 maltopentaose Resolution 2.50 Å

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		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.													.	.	320	.	.											.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																											.														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Query Sequence		V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P	C	.	K	I	N	L	I	P	W	N	P	F	P	G	A	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	G	R	S	.	.	.	.	.	.	.	.	.	.	S	N	S	R	I	D	R	F	S	K	V	L	M	S
Query Conservation																											.														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Alig confidence																											.														.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	I	L	H	A	W	N	W	S	F	N	T	L	K	H	N	M	K	D	I	H	D	A	G	Y	T	A	I	Q	T	S	P	I	N	Q	V	K	E	G	N	Q	G	D	K	S	M	S	N	W	Y	W	L	Y	Q	P	T	S	Y	Q	I	G	N	R	Y	L	G	T	E	Q	E	F	K	E	M	C	A	A	A	E	E
Template Known Secondary structure							T	T	B								T							T	T		S					S								T	G	G	G				G	G	G	G	G	G	G	G										T	T	T															T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	F	T	T	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	I	K	V	I	V
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions