Return to main results Retrieve Phyre Job Id

Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank95Aligned Residues234
% Identity32%Templatec3uxyC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: the crystal structure of short chain dehydrogenase from rhodobacter2 sphaeroides
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  LEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHID
Query Conservation 
 

 






 


 
 
  
   

 
    
                      
                      
Alig confidence 




































.........

































Template Conservation 
 









 


 


  

  

 

   
  .........  
                               
Template Sequence  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAV. . . . . . . . . AGIAADLHLPGDLREAAYADGLPGAVAAGLGRLD
Template Known Secondary structure 
TT
SSTTSTT

SS

.........TT


S



TTSS


Template Predicted Secondary structure 












.........





Template SS confidence 















































































   4.....10.........20.........30.........40 .........50.........60.........70....
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  ILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG
Query Conservation                                                      
   

            
  

 
   
Alig confidence 









































.




































Template Conservation                                            .          
   
            
  

     
Template Sequence  IVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIP. LXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALAS
Template Known Secondary structure 






B
GGG

T.TT


B

TTB
Template Predicted Secondary structure 






























.
















Template SS confidence 















































































   75....80.........90.........100.........110...... ...120.........130.........140.........150...
 
   168.170.........180.........190.........200 .........210.........220.........230.........240..
Predicted Secondary structure 

















.....

















Query SS confidence 
































. . . . .









































Query Sequence  VTRLMANEWAKHNINVNAIAPGYMATNNTQQLR. . . . . ADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGY
Query Conservation       
       



 
 

 
 
       .....             

 
   
 


  
  
 
  
  


 
Alig confidence 
































.....









































Template Conservation               
 

 
 

 
 
                         
  
   




  
  
 
  
  


 
Template Sequence  LTQCXGXDHAPQGIRINAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGS
Template Known Secondary structure  GGGTSSB

TTT

TTSTTSS
B
SGGGTT
SS
Template Predicted Secondary structure 





































Template SS confidence 















































































   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   243......250.
Predicted Secondary structure 




Query SS confidence 








Query Sequence  TIAVDGGWL
Query Conservation   
 



  
Alig confidence 








Template Conservation   
 



  
Template Sequence  LVEVNGGKA
Template Known Secondary structure 
TT

Template Predicted Secondary structure 




Template SS confidence 








   234.....240..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions