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Job DescriptionP37769
Confidence100.00%DateThu Jan 5 11:57:37 GMT 2012
Rank6Aligned Residues247
% Identity24%Templatec3svtA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:short-chain type dehydrogenase/reductase; PDBTitle: structure of a short-chain type dehydrogenase/reductase from2 mycobacterium ulcerans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40... ......50....... ..60.........70.........80.
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Query Sequence  SLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIV. . EPTETIEQVTALGR. . . RFLSLTADLRKIDGIPALLDRAVA
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Template Sequence  SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA
Template Known Secondary structure 

TT
TTTSTT
S
TT

SS


TTS
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS
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Template Sequence  WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVT
Template Known Secondary structure  S












GGG

TT


S

TT
T
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNG
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Template Sequence  KSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTG
Template Known Secondary structure  GGGT
SB
SGGGT

SSSS
B
SGGGTT

S
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   242.......250...
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Query Sequence  YTIAVDGGWLAR
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Template Sequence  QVINVDGGQMLR
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   244.....250.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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